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Report for CCDS45247.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45247.1 Public Homo sapiens 15 HAUS2 24 110 108 CCDS HistoryNCBI Gene:55142Re-query CCDS DB by CCDS ID:45247.1Re-query CCDS DB by GeneID:55142See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45247.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000568876.5 ENSP00000456578.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000568876.5Link to Ensembl Protein Viewer:ENSP00000456578.1Re-query CCDS DB by Nucleotide ID:ENST00000568876Re-query CCDS DB by Protein ID:ENSP00000456578
Original member Current member NCBI NM_001130447.2 NP_001123919.1 Accepted alive Link to Nucleotide Sequence:NM_001130447.2Link to Protein Sequence:NP_001123919.1Re-query CCDS DB by Nucleotide ID:NM_001130447Re-query CCDS DB by Protein ID:NP_001123919Link to BLAST:NP_001123919.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123919.1 204 Q9NVX0-3 204 100% 0 0

Chromosomal Locations for CCDS 45247.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 42548873 42548965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42559339 42559408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42561270 42561402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42563749 42563857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 42566607 42566816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (615 nt):
ATGGCCGCTGCCAACCCGTGGGACCCGGCGTCCGCGCCTAACGGCGCTGGGCTAGTGCTAGGCCACTTCA
TAGCTTCGGGGATGGTCAATCAGAAAAACCTGGAAATTGAACTCCTGAAACTAGAAAAAGATACAGCAGA
TGTTGTTCATCCTTTCTTTTTGGCTCAGAAGTGTCATACTCTGCAAAGCATGAATAATCATTTGGAAGCA
GTGCTGAAAGAGAAGAGATCCCTTAGGCAAAGACTGTTGAAACCCATGTGCCAGGAAAACTTACCTATTG
AAGCTGTTTATCACAGATATATGGTACATTTGCTGGAGTTGGCTGTGACTTTCATTGAGAGATTAGAAAC
CCACCTTGAAACAATTAGAAATATTCCTCATTTAGCTGCAAATCTAAAGAAAATGAACCAGGCTTTAGCA
AAGATGGATATATTGGTGACTGAGACAGAAGAACTGGCAGAGAATATACTCAAGTGGCGTAAACAACAAA
ACGAAGTTTCGTCTTGTATCCCCAAAATATTAGCTGAAGAAAGTTATCTTTATAAACATGATATTATAAT
GCCTCCTTTACCTTTTACTTCTAAAGTTCATGTCCAAACTATTAATGCCAAGTAG

Translation (204 aa):
MAAANPWDPASAPNGAGLVLGHFIASGMVNQKNLEIELLKLEKDTADVVHPFFLAQKCHTLQSMNNHLEA
VLKEKRSLRQRLLKPMCQENLPIEAVYHRYMVHLLELAVTFIERLETHLETIRNIPHLAANLKKMNQALA
KMDILVTETEELAENILKWRKQQNEVSSCIPKILAEESYLYKHDIIMPPLPFTSKVHVQTINAK


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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