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Report for CCDS45698.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45698.1 Public Homo sapiens 17 RUNDC3A 24 110 108 CCDS HistoryNCBI Gene:10900Re-query CCDS DB by CCDS ID:45698.1Re-query CCDS DB by GeneID:10900See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45698.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000426726.8 ENSP00000410862.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000426726.8Link to Ensembl Protein Viewer:ENSP00000410862.2Re-query CCDS DB by Nucleotide ID:ENST00000426726Re-query CCDS DB by Protein ID:ENSP00000410862
Original member Current member NCBI NM_001144825.2 NP_001138297.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001144825.2Link to Protein Sequence:NP_001138297.1Re-query CCDS DB by Nucleotide ID:NM_001144825Re-query CCDS DB by Protein ID:NP_001138297Link to BLAST:NP_001138297.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138297.1 446 Q59EK9-1 446 100% 0 0

Chromosomal Locations for CCDS 45698.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 44308833 44308939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44312580 44312695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44313104 44313252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44313418 44313503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44314735 44314824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44314929 44315009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44315155 44315320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44315452 44315609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44316385 44316522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44316619 44316725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 44318096 44318238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1341 nt):
ATGGAAGCGAGCTTTGTCCAGACCACCATGGCTCTGGGGCTGTCCTCCAAGAAAGCGTCCTCTCGCAACG
TGGCTGTGGAGCGTAAGAACCTGATCACCGTGTGCAGGTTCTCTGTGAAAACGCTGCTGGAGAAGTACAC
AGCGGAGCCCATCGATGACTCATCGGAGGAGTTTGTCAATTTTGCAGCCATTTTAGAGCAGATCCTCAGC
CACCGCTTCAAAGCCTGTGCCCCAGCAGGTCCAGTGAGCTGGTTCAGCTCAGACGGGCAGCGGGGCTTTT
GGGACTATATCCGGCTGGCCTGCAGCAAAGTGCCCAACAACTGTGTGAGCAGCATCGAGAACATGGAGAA
CATCAGCACAGCCCGGGCCAAGGGCCGGGCATGGATCCGGGTGGCACTGATGGAGAAGCGCATGTCAGAA
TACATCACCACGGCTCTGCGTGACACCCGGACCACCAGACGGTTCTATGACTCTGGAGCCATCATGCTGC
GGGATGAAGCCACCATCCTCACCGGAATGCTGATCGGACTGAGCGCCATCGACTTCAGCTTCTGTCTAAA
GGGGGAAGTCCTGGACGGGAAGACCCCCGTGGTCATCGATTACACGCCCTACCTAAAGTTCACGCAGAGC
TACGACTACCTGACGGACGAGGAGGAGCGGCACAGCGCCGAGAGCAGCACGAGCGAGGACAACTCGCCCG
AGCACCCGTACCTCCCGCTCGTCACCGATGAGGACAGCTGGTACAGCAAGTGGCACAAGATGGAGCAGAA
GTTCCGCATCGTCTACGCGCAGAAGGGCTACCTGGAGGAGCTGGTGCGTCTGCGCGAGTCGCAGCTGAAG
GACCTGGAGGCGGAGAACCGGCGGCTTCAGCTGCAGCTGGAGGAGGCGGCGGCGCAGAACCAGCGCGAGA
AACGGGAGCTGGAAGGCGTGATCCTGGAGCTGCAGGAGCAGCTGACAGGTCTGATCCCCAGTGACCACGC
CCCTCTGGCCCAGGGTTCCAAGGAGCTCACTACACCCCTGGTCAATCAATGGCCCTCACTGGGAACGCTT
AATGGGGCCGAGGGCGCCAGCAACTCCAAGCTCTACCGGAGACACAGCTTCATGAGCACGGAGCCGCTGT
CAGCTGAAGCCAGTCTGAGCTCGGACTCCCAGCGCCTGGGAGAGGGCACGCGGGACGAGGAGCCCTGGGG
TCCCATCGGGAAGGACCCCACGCCCTCCATGCTGGGCCTCTGCGGCTCCCTGGCCTCCATTCCCAGCTGC
AAGTCCCTGGCGAGCTTCAAATCCAACGAGTGCCTGGTGAGCGACAGTCCCGAGGGCAGCCCAGCACTGA
GCCCCAGCTGA

Translation (446 aa):
MEASFVQTTMALGLSSKKASSRNVAVERKNLITVCRFSVKTLLEKYTAEPIDDSSEEFVNFAAILEQILS
HRFKACAPAGPVSWFSSDGQRGFWDYIRLACSKVPNNCVSSIENMENISTARAKGRAWIRVALMEKRMSE
YITTALRDTRTTRRFYDSGAIMLRDEATILTGMLIGLSAIDFSFCLKGEVLDGKTPVVIDYTPYLKFTQS
YDYLTDEEERHSAESSTSEDNSPEHPYLPLVTDEDSWYSKWHKMEQKFRIVYAQKGYLEELVRLRESQLK
DLEAENRRLQLQLEEAAAQNQREKRELEGVILELQEQLTGLIPSDHAPLAQGSKELTTPLVNQWPSLGTL
NGAEGASNSKLYRRHSFMSTEPLSAEASLSSDSQRLGEGTRDEEPWGPIGKDPTPSMLGLCGSLASIPSC
KSLASFKSNECLVSDSPEGSPALSPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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