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Report for CCDS45710.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45710.1 Public Homo sapiens 17 ACBD4 24 110 108 CCDS HistoryNCBI Gene:79777Re-query CCDS DB by CCDS ID:45710.1Re-query CCDS DB by GeneID:79777See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45710.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000431281.5 ENSP00000405969.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000431281.5Link to Ensembl Protein Viewer:ENSP00000405969.1Re-query CCDS DB by Nucleotide ID:ENST00000431281Re-query CCDS DB by Protein ID:ENSP00000405969
Original member Current member EBI ENST00000586346.5 ENSP00000465484.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000586346.5Link to Ensembl Protein Viewer:ENSP00000465484.1Re-query CCDS DB by Nucleotide ID:ENST00000586346Re-query CCDS DB by Protein ID:ENSP00000465484
Original member Current member EBI ENST00000591859.5 ENSP00000465610.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591859.5Link to Ensembl Protein Viewer:ENSP00000465610.1Re-query CCDS DB by Nucleotide ID:ENST00000591859Re-query CCDS DB by Protein ID:ENSP00000465610
Original member Current member NCBI NM_001135706.3 NP_001129178.1 Accepted alive Link to Nucleotide Sequence:NM_001135706.3Link to Protein Sequence:NP_001129178.1Re-query CCDS DB by Nucleotide ID:NM_001135706Re-query CCDS DB by Protein ID:NP_001129178Link to BLAST:NP_001129178.1
Original member Current member NCBI NM_001321352.2 NP_001308281.1 Accepted alive Link to Nucleotide Sequence:NM_001321352.2Link to Protein Sequence:NP_001308281.1Re-query CCDS DB by Nucleotide ID:NM_001321352Re-query CCDS DB by Protein ID:NP_001308281Link to BLAST:NP_001308281.1
Original member Current member NCBI NM_001321353.2 NP_001308282.1 Accepted alive Link to Nucleotide Sequence:NM_001321353.2Link to Protein Sequence:NP_001308282.1Re-query CCDS DB by Nucleotide ID:NM_001321353Re-query CCDS DB by Protein ID:NP_001308282Link to BLAST:NP_001308282.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129178.1 341 Q8NC06-3 341 100% 0 0
NP_001308281.1 341 Q8NC06-3 341 100% 0 0
NP_001308282.1 341 Q8NC06-3 341 100% 0 0

Chromosomal Locations for CCDS 45710.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 45136145 45136232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45136500 45136620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45136692 45136776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45137019 45137139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45137368 45137454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45137722 45137830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45137913 45137988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45139021 45139160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45143443 45143641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1026 nt):
ATGGGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGGCTGCAGTGAGCGTCATCC
AGAACCTGCCCAAGAACGGTTCTTACCGCCCCTCCTATGAAGAGATGCTGCGATTCTACAGTTACTACAA
GCAGGCCACCATGGGGCCCTGCCTGGTCCCCCGGCCCGGGTTCTGGGACCCCATTGGACGATATAAGTGG
GACGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGGAGGCCATGTCTGCCTACATCACTGAAATGAAAC
TGGTGGCACAGAAGGTGATCGACACAGTGCCCCTGGGTGAGGTGGCAGAGGACATGTTTGGTTACTTCGA
GCCCCTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAGAGACCTTCCTGAGAAGGGTCACAGGTTGG
AAAGAGCAGGTTGTGAATGGAGATGTTGGGGCTGTTTCAGAGCCTCCCTGCCTCCCCAAGGAACCGGCAC
CCCCAAGCCCAGCTTCCCTCTGGGCAGTAACTCTACCAACCCCTCCACAGAGTCCCATTCACCCAGGGAC
CTGGACTCCGAGGTTTTCTGTGATTCCCTGGAGCAGCTGGAGCCTGAGCTGGTTTGGACAGAGCAGCGGG
CAGCATCTGGAGGAAAGCGTGATCCCAGGAACAGCCCCGTGCCCCCCACAAAGAAAGAGGGGTTGCGGGG
CAGCCCGCCGGGGCCCCAGGAGTTGGACGTGTGGCTGCTGGGGACAGTTCGAGCACTACAGGAGAGCATG
CAGGAGGTGCAGGCGAGGGTGCAGAGCCTGGAGAGCATGCCCCGGCCCCCTGAGCAGAGGCCGCAGCCCA
GGCCCAGTGCTCGGCCATGGCCCCTTGGGCTCCCGGGGCCCGCGCTGCTCTTCTTCCTCCTGTGGCCCTT
CGTCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAGAGGTGACTGTCAGTGGAGGGGTCTCTGCAG
CCAACTGAGACTATCTTGCTGTGCCCTGAGCCTTCCTAGGGTTTAG

Translation (341 aa):
MGTEKESPEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKW
DAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVPLGEVAEDMFGYFEPLYQVIPDMPRPPETFLRRVTGW
KEQVVNGDVGAVSEPPCLPKEPAPPSPASLWAVTLPTPPQSPIHPGTWTPRFSVIPWSSWSLSWFGQSSG
QHLEESVIPGTAPCPPQRKRGCGAARRGPRSWTCGCWGQFEHYRRACRRCRRGCRAWRACPGPLSRGRSP
GPVLGHGPLGSRGPRCSSSSCGPSSSSGSSECFGPKRGDCQWRGLCSQLRLSCCALSLPRV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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