NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS46676.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46676.1 Public Homo sapiens 22 KIAA1671 24 110 108 CCDS HistoryNCBI Gene:85379Re-query CCDS DB by CCDS ID:46676.1Re-query CCDS DB by GeneID:85379See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46676.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358431.8 ENSP00000351207.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358431.8Link to Ensembl Protein Viewer:ENSP00000351207.3Re-query CCDS DB by Nucleotide ID:ENST00000358431Re-query CCDS DB by Protein ID:ENSP00000351207
Original member Current member EBI ENST00000406486.8 ENSP00000385152.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406486.8Link to Ensembl Protein Viewer:ENSP00000385152.3Re-query CCDS DB by Nucleotide ID:ENST00000406486Re-query CCDS DB by Protein ID:ENSP00000385152
Original member Current member NCBI NM_001145206.2 NP_001138678.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001145206.2Link to Protein Sequence:NP_001138678.1Re-query CCDS DB by Nucleotide ID:NM_001145206Re-query CCDS DB by Protein ID:NP_001138678Link to BLAST:NP_001138678.1
Original member Current member NCBI NM_001386932.1 NP_001373861.1 Accepted alive Link to Nucleotide Sequence:NM_001386932.1Link to Protein Sequence:NP_001373861.1Re-query CCDS DB by Nucleotide ID:NM_001386932Re-query CCDS DB by Protein ID:NP_001373861Link to BLAST:NP_001373861.1
Original member Current member NCBI NM_001386933.1 NP_001373862.1 Accepted alive Link to Nucleotide Sequence:NM_001386933.1Link to Protein Sequence:NP_001373862.1Re-query CCDS DB by Nucleotide ID:NM_001386933Re-query CCDS DB by Protein ID:NP_001373862Link to BLAST:NP_001373862.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138678.1 1806 Q9BY89-1 1806 100% 0 0
NP_001373861.1 1806 Q9BY89-1 1806 100% 0 0
NP_001373862.1 1806 Q9BY89-1 1806 100% 0 0

Chromosomal Locations for CCDS 46676.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 25028000 25029540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 25032609 25032696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 25038760 25041525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 25049230 25049364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 25170820 25170938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 25174240 25174489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 25177348 25177522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 25181699 25181823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 25184977 25185119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 25190702 25190780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5421 nt):
ATGGCCACGCGGGTCGAGGTGGGCTCCATAACGCCCTTGACGGCCGTGCCAGGCCTGGGTGAGATGGGCA
AGGAGGAGACCCTGACGAGGACCTACTTCCTCCAGGCCGGCGAAGCCTCTGGGGCTCCCCCAGCCCGGAT
CTTGGAAGCGAAGAGCCCCCTGCGGAGCCCGGCCCGGTTACTCCCTCTGCCAAGGCTCGCCCCCAAACCC
TTCTCGAAGGAGCAGGACGTGAAATCTCCTGTCCCGTCTCTGCGGCCCAGTTCGACTGGACCTTCCCCCT
CTGGGGGGCTCTCTGAGGAGCCAGCAGCAAAGGATCTGGACAACAGGATGCCCGGCTTGGTGGGGCAGGA
GGTGGGCAGTGGGGAGGGCCCGAGGACGAGCTCGCCCCTCTTCAACAAGGCTGTGTTCCTGCGGCCCAGC
TCCAGCACCATGATTCTCTTCGAAACCACCAAAAGCGGCCCCGCTCTGGGGAAGGCGGTTAGTGAGGGGG
CGGAGGAGGCCAAGCTAGGTGTGTCCGGCTCCCGGCCTGAGGTGGCTGCCAAGCCCGCCCTGCCCACCCA
GAAGCCTGCGGGGACCCTTCCCCGGTCAGCTCCCCTGTCTCAGGACACAAAACCACCTGTACCCCAAGAG
GAGGCAGGCCAAGACCATCCTCCCTCAAAGGCCAGCAGTGTGGAGGACACGGCACGCCCCCTTGTGGAGC
CCAGGCCTCGCCTGAAGAGAAGGCCCGTGTCTGCCATTTTCACGGAGTCCATTCAGCCTCAGAAGCCAGG
CCCCGGCGCAGCGGCCACAGTGGGCAAAGTGCCACCCACCCCTCCCGAGAAGACGTGGGTGAGGAAGCCC
AGGCCCTTGTCCATGGACCTCACGGCCCGGTTTGAGAACAAAGAGGCCTTGCTGAGGAAGGTGGCCGATG
AAGGAAGTGGACCCACAGCAGGGGATATGGCTGGGCTAGAGAGGCCCAGAGCAGCGTCCAAGCTGGACAG
GGACTGTTTGGTCAAGGCGGAGGCTCCTCTTCATGATCCTGATTTGGACTTCCTGGAGGTGGCCAAGAAA
ATCCGTGAACGGAAGGAGAAGATGCTTTCGAAGCCGGAGATGGGCAGCCCCAGAGCCCTGGTGGGGGGCT
CATCTGGGGTCACCCCCAGCAATGACCAGAGTCCCTGGGAAGAAAAGGCCAAGCTGGACCCAGAGCCAGA
GAAGGCTGCTGAGTCCCCCTCACCCAGGCTGGGAAGGGGCCTAGAACTTGCTGAGGTTAAGAGCAGAGTG
GCGGATGGGGAGGCCGCGGCAGGGGGAGAGTGGGCCTCCAGGAGGAGTGTCAGGAAGTGCATCAGCCTGT
TTCGGGAGGACAGCACCTTGGCCTTGGCAGTGGGGTCTGAATCTCCCCTGGCCACCCCTGCGTCCCCATC
GGCGGCACCAGAGCCGGAGAAAGGGGTTGTGAGCGTTCAGGAACGGATCAGAGGCTGGACTGCCGAGAGC
TCAGAGGCTAAGCCCGAGGTCAGGAGGAGGACGTTCCAGGCTCGGCCGCTGTCGGCGGATTTGACCAAAT
TGTTTTCAAGTTCAGCTTCCAGCAACGAAGTCAAATATGAGAAGAGTGCTGAGCTGAGCGGCGAGTTTCC
TAAGGAACCGAGAGAAAAGCAAAAGGAGGGGCACAGTTTGGATGGAGCATGCATCCCGAGAAGCCCCTGG
AAGCCTGGGACACTCCGGGATAAGTCCAGGCAGACGGAGCAGAAGGTTAGCTCTAACCAAGACCCCGACA
GCTGTCGCGGTGGAAGCTCAGTGGAGGCCCCGTGCCCTTCTGACGTCACTCCAGAGGATGACCGGAGCTT
CCAGACTGTGTGGGCCACAGTATTTGAGCACCACGTGGAGAGACACACAGTGGCTGACCAGTCGGGACGT
TGTCTCTCCACCACACCCCCTGGTGACATGGCCCATGCCCGTGTCTCAGAACCCAGGCCGAGGCCTGAGA
TGGGCTCTTGGCTGGGCAGGGACCCACCAGACATGACAAAACTGAAGAAAGAGAACTCCAGAGGGTTTGA
CAATCCCGAGACGGAGAAATTGGGACCAACCACCCTTTTGAATGGTGAACTGAGACCGTATCACACGCCT
CTCCGGGACAAATACCCTTTGTCTGAAAACCACAATAATAACACCTTCCTCAAACACTTGGAAAATCCTC
CCACATCGCAGAGAATTGAGCCCAGATATGACATTGTGCATGCAGTGGGAGAGCGTGTGCACAGCGAGGC
CATCTCACCGGCACCGGAGGAGAAAGCGGTCACGCTCCGCAGCCTCAGGTCTTGGCTCTCACTGAAGGAC
AGGCAGCTGTCCCAGGAGGTCACCCCTGCTGACCTGGAGTGTGGTTTGGAAGGTCAGGCGGGGTCCGTCC
AAAGGGCCAGTTTGATTTGGGAAGCTCGAGGCATGCCTGAGGCTAGTGGACCGAAGTTTGGGGGCAATTG
CCCGTTTCCCAAATGGACAGGCGGGGCAGTGGTGAGCTCGCACAAAGCCACCGTGGCAGTCAGCGAAGAG
CACTGTGCTCCCGGGGCCACCTCCGTCAGGGCTATCAAGGCTGCCATCTGGGAAAGCCAGCATGAGGGGC
CAGAGGGGGCCAGAAGCAAGCCAGGAGTGGGAGCAAGGGGCCCACCCCAGGGATGCCCCCTCGATCCTCT
TTCCAGGGCTACGAATGGGCCTTCTGACTCCCAAGCACGAACACATCCAGATGCATTTGCTGTGCAGAAA
GGGCCCTTCATTGTAGCCGCCAGGGAGGGTGATCCAGGGCCGGCCCAGGTGCCACAGCCTGCAGTCAGAA
TGCGGAAAGCCGGCGCCATGGACCAGAGAATGGACAGATGGCGGCGGCGGACTTTACCCCCCAACGTGAA
ATTTGATACATTCAGTTCTCTTGTCCCAGAGGACTCTCCACATGTGGGGCACAGACGAACAGATTATGTG
AGCCCCACAGCCAGTGCCTTAAGAAAACCTCAACTATCCCACTACAGGGTGGAGACCCAGGAGGTGAACC
CAGGTGCTTCACGGGACCAGACTTCCCCAGCAGTGAAGCAAGGGTCACCTGTGGAACCCAAGGCGACATT
TTTTGCAGTCACCTATCAGATTCCCAATACTCAAAAGGCAAAGGGTGTGGTTCTGTCAGGAGCTGAAAGC
TTGCTGGAACATTCTAGAAAAATCACTCCACCCTCGTCTCCTCATTCTTTAACATCCACTTTGGTTTCTC
TTGGTCATGAAGAGGCATTGGAGATGGCAGGCAGTAAAAACTGGATGAAGGGACGAGAGCATGAAAATGC
AAGCATTTTAAAAACTCTGAAGCCAACAGACCGTCCATCATCTCTTGGGGCCTGGAGTCTGGACCCTTTC
AATGGAAGAATCATTGATGTGGATGCCTTATGGAGTCATCGGGGATCAGAAGATGGCCCTCGTCCTCAAA
GCAATTGGAAGGAAAGTGCGAACAAGATGTCCCCCAGCGGCGGAGCTCCCCAAACCACCCCGACTCTGAG
GAGTCGTCCAAAAGATCTTCCTGTGAGAAGGAAGACTGATGTGATCAGTGACACGTTCCCAGGTAAAATC
AGAGATGGCTACAGATCCAGCGTTCTTGACATTGACGCCCTGATGGCAGAGTACCAGGAGCTGTCGCTGA
AAGTCCCTGGGGAGGCTCAGGAGAGGAGGAGTCCCACCGTGGAGCCCAGTACGTTGCCTCGGGAGAGGCC
TGTTCAGCTGGGCGGGGTGGAGCAGAGAAGGAGGAGCCTGAAGGAGATGCCCGATACCGGGGGTCTCTGG
AAACCGGCCAGTTCTGCCGAAATAAATCACAGTTTCACTCCTGGCTTAGGCAAGCAGCTGGCAGAGACCT
TGGAGACAGCCATGGGCACCAAATCTAGCCCTCCCTTCTGGGCTCTGCCACCCTCGGCTCCTTCTGAAAG
GTATCCAGGGGGCTCTCCTATACCTGCGGATCCCAGGAAAAAAACGGGGTTTGCTGAGGATGACAGAAAG
GCCTTTGCCAGTAAACATCATGTTGCAAAGTGTCAGAATTACCTGGCTGAGTCAAAGCCCTCTGGTCGGG
AGGATCCAGGCAGTGGGGTCAGGGTGTCACCCAAATCGCCCCCCACTGACCAGAAGAAAGGGACCCCAAG
GAAATCCACCGGGCGGGGAGAGGAGGACAGTGTGGCCCAGTGGGGTGACCACCCACGTGACTGTGGACGG
GTGCCGCTGGATATCAAGAGGGCCTACTCAGAGAAGGGGCCCCCTGCCAACATCCGAGAGGGCCTGTCCA
TCATGCATGAAGCCAGAGAGAGGAGGCGAGAGCAGCCCAAAGGGAGGCCCAGCCTTACTGGAGAGAATTT
GGAGGCCAAAATGGGACCCTGTTGGTGGGAGTCAGGGACTGGAGACAGTCACAAGGTGCTGCCACGGGAC
CTGGAGAAGGAGGATGCCCCCCAGGAGAAGGAGCGACCGCTCCAGCAGGTGTCCCCTGTGGCCTCGGTTC
CCTGGAGAAGCCACAGCTTCTGCAAAGACAGGAGGAGTGGGCCCTTTGTGGACCAGCTGAAGCAGTGTTT
CTCCCGGCAGCCCACTGAACCCAAGGACACTGACACCCTCGTGCACGAAGCCGGCAGCCAGTATGGGACG
TGGACAGAGCAGTGCCAGAGTGGGGAGAGCTTGGCCACTGAGTCCCCAGATAGCAGTGCCACATCGACAA
GGAAACAGCCCCCCAGCAGCCGTTTGTCTTCTCTGTCCTCCCAAACGGAGCCCACCTCGGCAGGGGACCA
GTATGACTGCTCCAGGGACCAGCGGAGCACCAGCGTGGACCACTCCAGCACTGACCTGGAATCCACCGAT
GGGATGGAGGGGCCGCCTCCACCGGACGCCTGCCCTGAAAAGAGAGTAGATGACTTCTCCTTCATTGATC
AAACCTCAGTCCTCGACTCAAGTGCCCTCAAGACCCGGGTGCAGCTCAGCAAGAGAAGCCGCCGCCGGGC
CCCCATCTCCCACTCCCTCCGGCGCAGCCGATTTAGTGAGTCCGAGAGCAGATCACCTTTGGAGGATGAG
ACTGACAACACGTGGATGTTCAAAGACTCAACGGAGGAGAAATCACCCAGGAAGGAGGAGTCGGATGAGG
AGGAGACGGCATCCAAAGCTGAGAGGACCCCTGTCAGCCATCCTCAGAGGATGCCTGCGTTTCCAGGCAT
GGATCCGGCAGTGCTAAAGGCTCAGCTGCACAAGAGGCCAGAGGTGGACAGTCCTGGCGAGACCCCCAGC
TGGGCACCCCAACCCAAGAGCCCCAAGTCCCCCTTCCAGCCTGGGGTGCTGGGCAGTCGCGTGCTGCCTT
CCAGCATGGACAAGGATGAGAGGTCGGATGAACCCTCTCCCCAGTGGCTAAAGGAATTGAAATCCAAGAA
GAGGCAAAGTCTTTATGAGAACCAAGTTTGA

Translation (1806 aa):
MATRVEVGSITPLTAVPGLGEMGKEETLTRTYFLQAGEASGAPPARILEAKSPLRSPARLLPLPRLAPKP
FSKEQDVKSPVPSLRPSSTGPSPSGGLSEEPAAKDLDNRMPGLVGQEVGSGEGPRTSSPLFNKAVFLRPS
SSTMILFETTKSGPALGKAVSEGAEEAKLGVSGSRPEVAAKPALPTQKPAGTLPRSAPLSQDTKPPVPQE
EAGQDHPPSKASSVEDTARPLVEPRPRLKRRPVSAIFTESIQPQKPGPGAAATVGKVPPTPPEKTWVRKP
RPLSMDLTARFENKEALLRKVADEGSGPTAGDMAGLERPRAASKLDRDCLVKAEAPLHDPDLDFLEVAKK
IRERKEKMLSKPEMGSPRALVGGSSGVTPSNDQSPWEEKAKLDPEPEKAAESPSPRLGRGLELAEVKSRV
ADGEAAAGGEWASRRSVRKCISLFREDSTLALAVGSESPLATPASPSAAPEPEKGVVSVQERIRGWTAES
SEAKPEVRRRTFQARPLSADLTKLFSSSASSNEVKYEKSAELSGEFPKEPREKQKEGHSLDGACIPRSPW
KPGTLRDKSRQTEQKVSSNQDPDSCRGGSSVEAPCPSDVTPEDDRSFQTVWATVFEHHVERHTVADQSGR
CLSTTPPGDMAHARVSEPRPRPEMGSWLGRDPPDMTKLKKENSRGFDNPETEKLGPTTLLNGELRPYHTP
LRDKYPLSENHNNNTFLKHLENPPTSQRIEPRYDIVHAVGERVHSEAISPAPEEKAVTLRSLRSWLSLKD
RQLSQEVTPADLECGLEGQAGSVQRASLIWEARGMPEASGPKFGGNCPFPKWTGGAVVSSHKATVAVSEE
HCAPGATSVRAIKAAIWESQHEGPEGARSKPGVGARGPPQGCPLDPLSRATNGPSDSQARTHPDAFAVQK
GPFIVAAREGDPGPAQVPQPAVRMRKAGAMDQRMDRWRRRTLPPNVKFDTFSSLVPEDSPHVGHRRTDYV
SPTASALRKPQLSHYRVETQEVNPGASRDQTSPAVKQGSPVEPKATFFAVTYQIPNTQKAKGVVLSGAES
LLEHSRKITPPSSPHSLTSTLVSLGHEEALEMAGSKNWMKGREHENASILKTLKPTDRPSSLGAWSLDPF
NGRIIDVDALWSHRGSEDGPRPQSNWKESANKMSPSGGAPQTTPTLRSRPKDLPVRRKTDVISDTFPGKI
RDGYRSSVLDIDALMAEYQELSLKVPGEAQERRSPTVEPSTLPRERPVQLGGVEQRRRSLKEMPDTGGLW
KPASSAEINHSFTPGLGKQLAETLETAMGTKSSPPFWALPPSAPSERYPGGSPIPADPRKKTGFAEDDRK
AFASKHHVAKCQNYLAESKPSGREDPGSGVRVSPKSPPTDQKKGTPRKSTGRGEEDSVAQWGDHPRDCGR
VPLDIKRAYSEKGPPANIREGLSIMHEARERRREQPKGRPSLTGENLEAKMGPCWWESGTGDSHKVLPRD
LEKEDAPQEKERPLQQVSPVASVPWRSHSFCKDRRSGPFVDQLKQCFSRQPTEPKDTDTLVHEAGSQYGT
WTEQCQSGESLATESPDSSATSTRKQPPSSRLSSLSSQTEPTSAGDQYDCSRDQRSTSVDHSSTDLESTD
GMEGPPPPDACPEKRVDDFSFIDQTSVLDSSALKTRVQLSKRSRRRAPISHSLRRSRFSESESRSPLEDE
TDNTWMFKDSTEEKSPRKEESDEEETASKAERTPVSHPQRMPAFPGMDPAVLKAQLHKRPEVDSPGETPS
WAPQPKSPKSPFQPGVLGSRVLPSSMDKDERSDEPSPQWLKELKSKKRQSLYENQV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH