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Report for CCDS46897.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46897.1 Public Homo sapiens 3 MYLK 24 110 108 CCDS HistoryNCBI Gene:4638Re-query CCDS DB by CCDS ID:46897.1Re-query CCDS DB by GeneID:4638See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46897.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000418370.6 ENSP00000428967.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000418370.6Link to Ensembl Protein Viewer:ENSP00000428967.1Re-query CCDS DB by Nucleotide ID:ENST00000418370Re-query CCDS DB by Protein ID:ENSP00000428967
Original member Current member EBI ENST00000583087.6 ENSP00000462118.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000583087.6Link to Ensembl Protein Viewer:ENSP00000462118.1Re-query CCDS DB by Nucleotide ID:ENST00000583087Re-query CCDS DB by Protein ID:ENSP00000462118
Original member Current member NCBI NM_053032.4 NP_444260.1 Accepted alive Link to Nucleotide Sequence:NM_053032.4Link to Protein Sequence:NP_444260.1Re-query CCDS DB by Nucleotide ID:NM_053032Re-query CCDS DB by Protein ID:NP_444260Link to BLAST:NP_444260.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_444260.1 154 Q15746-8 154 100% 0 0

Chromosomal Locations for CCDS 46897.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 123614105 123614349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123618639 123618770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123620207 123620294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (465 nt):
ATGGCAATGATCTCAGGGCTCAGTGGCAGGAAATCCTCAACAGGGTCACCAACCAGCCCGCTCAATGCAG
AAAAACTAGAATCTGAAGAAGATGTGTCCCAAGCTTTCCTTGAGGCTGTTGCTGAGGAAAAGCCTCATGT
AAAACCCTATTTCTCTAAGACCATTCGCGATTTAGAAGTTGTGGAGGGAAGTGCTGCTAGATTTGACTGC
AAGATTGAAGGATACCCAGACCCCGAGGTTGTCTGGTTCAAAGATGACCAGTCAATCAGGGAGTCCCGCC
ACTTCCAGATAGACTACGATGAGGACGGGAACTGCTCTTTAATTATTAGTGATGTTTGCGGGGATGACGA
TGCCAAGTACACCTGCAAGGCTGTCAACAGTCTTGGAGAAGCCACCTGCACAGCAGAGCTCATTGTGGAA
ACGATGGAGGAAGGTGAAGGGGAAGGGGAAGAGGAAGAAGAGTGA

Translation (154 aa):
MAMISGLSGRKSSTGSPTSPLNAEKLESEEDVSQAFLEAVAEEKPHVKPYFSKTIRDLEVVEGSAARFDC
KIEGYPDPEVVWFKDDQSIRESRHFQIDYDEDGNCSLIISDVCGDDDAKYTCKAVNSLGEATCTAELIVE
TMEEGEGEGEEEEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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