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Report for CCDS47063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47063.1 Public Homo sapiens 4 CENPC 24 110 108 CCDS HistoryNCBI Gene:1060Re-query CCDS DB by CCDS ID:47063.1Re-query CCDS DB by GeneID:1060See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47063.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000273853.11 ENSP00000273853.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000273853.11Link to Ensembl Protein Viewer:ENSP00000273853.6Re-query CCDS DB by Nucleotide ID:ENST00000273853Re-query CCDS DB by Protein ID:ENSP00000273853
Original member Current member NCBI NM_001812.4 NP_001803.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001812.4Link to Protein Sequence:NP_001803.2Re-query CCDS DB by Nucleotide ID:NM_001812Re-query CCDS DB by Protein ID:NP_001803Link to BLAST:NP_001803.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001803.2 943 Q03188-1 943 100% 0 0

Chromosomal Locations for CCDS 47063.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 67472605 67472675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67474888 67474978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67489967 67490121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67492180 67492275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67492869 67492997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67493884 67493988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67495159 67495212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67505205 67505284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67506788 67506934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67508814 67509105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67512402 67512569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67514074 67514687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67518156 67518368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67519217 67519502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67530815 67530914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67539840 67539934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67540980 67541050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67544149 67544195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 67545338 67545355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2832 nt):
ATGGCTGCGTCCGGTCTGGATCATCTCAAAAATGGCTACAGAAGAAGATTTTGTCGACCTTCCAGGGCAC
GT
GACATTAACACAGAGCAAGGCCAGAATGTTCTGGAAATCTTACAAGACTGTTTTGAAGAAAAAAGTCT
T
GCCAATGATTTTAGTACAAATTCTACAAAATCAGTGCCTAATTCAACACGCAAAATAAAAGACACTTGT
ATT
CAGTCACCAAGCAAAGAGTGCCAGAAATCACATCCAAAGTCAGTTCCAGTTTCTTCAAAGAAGAAAG
AA
GCCTCTCTACAGTTTGTTGTAGAACCAAGTGAAGCCACAAACAGATCAGTTCAGGCCCATGAAGTTCA
T
CAGAAAATTCTGGCAACTGATGTTAGTTCCAAAAATACACCTGACTCGAAAAAAATATCAAGTAGAAAC
ATA
AATGATCATCACAGTGAAGCTGATGAAGAATTTTACTTATCCGTTGGCTCACCTTCTGTTCTTTTGG
AT
GCAAAAACATCTGTATCACAAAATGTTATTCCATCTAGTGCCCAAAAGAGAGAGACTTACACTTTTGA
A
AATTCAGTAAATATGCTGCCTTCAAGTACAGAGGTTTCAGTTAAAACCAAAAAAAGGTTAAACTTTGAT
GAT
AAAGTTATGTTAAAGAAAATAGAAATAGATAATAAAGTATCAGATGAAGAGGATAAAACATCGGAAG
GA
CAAGAAAGAAAACCATCAGGATCATCTCAGAATAGAATACGAGATTCAGAATATGAAATTCAACGACA
A
GCTAAAAAAAGTTTTTCAACATTGTTTTTAGAAACAGTAAAACGAAAAAGTGAATCCAGTCCCATTGTT
AGG
CATGCGGCAACTGCTCCACCTCATTCGTGTCCTCCCGATGATACGAAGTTGATAGAGGATGAATTTA
TA
ATTGATGAGTCGGATCAAAGTTTTGCCAGTAGATCTTGGATTACAATACCAAGAAAGGCAGGGTCTCT
G
AAACAACGCACAATATCCCCGGCTGAGAGCACTGCACTCCTTCAAGGTAGAAAGTCAAGAGAAAAGCAT
CAT
AATATATTACCTAAGACTTTGGCAAATGACAAACATTCCCATAAACCTCACCCAGTAGAGACATCTC
AG
CCCTCTGATAAAACAGTACTGGATACAAGTTATGCTTTGATAGGTGAAACAGTAAATAATTATAGATC
T
ACAAAATATGAAATGTATTCCAAGAATGCAGAAAAACCATCTAGAAGCAAAAGGACTATAAAACAAAAA
CAG
AGAAGAAAATTCATGGCTAAACCAGCTGAAGAACAGCTTGATGTGGGACAGTCTAAAGATGAAAACA
TA
CATACATCACATATTACCCAAGACGAATTTCAAAGAAATTCAGACAGAAATATGGAAGAGCATGAAGA
G
ATGGGAAATGATTGTGTTTCCAAAAAACAGATGCCACCTGTGGGAAGCAAGAAAAGTAGCACTAGAAAA
GAT
AAGGAAGAATCTAAAAAGAAGCGCTTTTCCAGTGAGTCCAAGAACAAACTTGTACCTGAAGAAGTGA
CT
TCAACTGTCACGAAAAGTCGAAGAATTTCCAGGCGTCCATCTGATTGGTGGGTGGTAAAATCAGAGGA
G
AGTCCTGTTTATAGCAATTCTTCAGTAAGAAATGAATTACCAATGCATCACAATAGTAGCCGAAAATCT
ACT
AAGAAAACAAATCAGTCATCTAAGAATATTAGGAAAAAAACTATTCCACTTAAAAGGCAGAAGACAG
CA
ACTAAAGGCAACCAAAGAGTACAGAAGTTTTTAAATGCTGAAGGTTCTGGAGGTATCGTTGGTCATGA
T
GAAATTTCCAGATGTTCGCTGAGTGAGCCATTGGAAAGTGATGAGGCAGACTTGGCTAAGAAGAAAAAT
CTT
GATTGTTCTAGATCTACAAGAAGCTCAAAGAATGAAGATAACATTATGACTGCACAGAATGTTCCCC
TA
AAGCCTCAGACCAGTGGATATACATGTAATATACCAACAGAGTCAAACTTGGATTCTGGAGAGCATAA
G
ACTTCAGTTTTAGAGGAAAGTGGACCTTCCAGGCTCAATAATAATTATTTAATGTCTGGAAAGAATGAT
GTG
GATGATGAGGAAGTTCATGGAAGTTCAGATGACTCAAAACAATCTAAAGTGATACCAAAGAACAGAA
TC
CATCACAAACTAGTATTGCCCTCCAACACACCAAATGTTCGCAGGACCAAGAGAACACGTTTGAAACC
T
TTGGAGTACTGGCGAGGAGAGCGAATAGATTATCAAGGAAGGCCATCAGGAGGATTCGTGATTAGTGGA
GTA
CTATCTCCAGACACAATATCGTCTAAAAGGAAGGCAAAAGAAAATATTGGAAAAGTCAACAAAAAAT
CT
AATAAGAAAAGGATCTGTCTTGATAACGATGAAAGAAAGACTAACTTAATGGTAAATCTAGGTATACC
T
CTTGGAGATCCTTTGCAGCCAACGAGGGTAAAGGACCCAGAAACAAGAGAGATTATTCTCATGGATCTT
GTA
AGGCCACAAGATACATATCAATTTTTTGTTAAGCATGGTGAGTTGAAGGTATACAAGACATTGGATA
CA
CCCTTTTTTTCTACTGGGAAATTGATATTAGGACCACAAGAAGAAAAGGGAAAGCAGCATGTTGGCCA
G
GATATATTGGTTTTTTATGTTAACTTTGGTGACCTTTTGTGTACTTTACATGAAACACCTTATATATTA
AGT
ACTGGGGATTCGTTCTATGTTCCTTCAGGTAACTATTATAACATCAAAAATCTCCGGAATGAGGAAA
GT
GTTCTTCTTTTTACTCAGATAAAAAGATGA


Translation (943 aa):
MAASGLDHLKNGYRRRFCRPSRARDINTEQGQNVLEILQDCFEEKSLANDFSTNSTKSVPNSTRKIKDTC
I
QSPSKE
CQKSHPKSVPVSSKKKEASLQFVVEPSEATNRSVQAHEVHQKILATDVSSKNTPDSKKISSRN
I
NDHHSEADEEFYLSVGSPSVLLDAKTSVSQNVIPSSAQKRETYTFENSVNMLPSSTEVSVKTKK
RLNFD
D
KVMLKKIEIDNKVSDEEDKTSEGQERKPSGSSQNRIRDSEYEIQRQAKKSFSTLFLETVKRKSES
SPIV
R
HAATAPPHSCPPDDTKLIEDEFIIDESDQSFASRSWITIPRKAGSLKQRTISPAESTALLQGRKSREKH
H
NILPKTLANDKHSHKPHPVETSQPSDKTVLDTSYALIGETVNNYRSTKYEMYSKNAEKPSRSKRTIKQK
Q
RRKFMAKPAEEQLDVGQSKDENIHTSHITQDEFQRNSDRNMEEHEEMGNDCVSKKQMPPV
GSKKSSTRK
D
KEESKKKRFSSESKNKLVPEEVTSTVTKSRRISRRPSDWWVVKSEE
SPVYSNSSVRNELPMHHNSSRKS
T
KKTNQSSKNIRKKTIPLKRQKTATKGNQRVQKFLNAEGSGGIVGHDEISRCSLSEPLESDEADLAKKKN
L
DCS
RSTRSSKNEDNIMTAQNVPLKPQTSGYTCNIPTESNLDSGEHKTSVLEESGPSRLNNNYLMSGKND
V
DDEEVHGSS
DDSKQSKVIPKNRIHHKLVLPSNTPNVRRTKRTRLKPLEYWRGERIDYQGRPSGGFVISG
V
LSPDTISSKRKAKENIGKVNKKSNKKRICLDNDER
KTNLMVNLGIPLGDPLQPTRVKDPETREIILMDL
V
RPQDTYQFFVKHGELKVYKTLDTPFFSTGKLILGPQEEKGKQHVGQDIL
VFYVNFGDLLCTLHETPYIL
S
TGDSFYVPS
GNYYNIKNLRNEESVLLFTQIKR



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser