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Report for CCDS47677.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47677.1 Public Homo sapiens 7 FAM185A 24 110 108 CCDS HistoryNCBI Gene:222234Re-query CCDS DB by CCDS ID:47677.1Re-query CCDS DB by GeneID:222234See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47677.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409231.7 ENSP00000387066.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000409231.7Link to Ensembl Protein Viewer:ENSP00000387066.3Re-query CCDS DB by Nucleotide ID:ENST00000409231Re-query CCDS DB by Protein ID:ENSP00000387066
Original member Current member NCBI NM_001145269.2 NP_001138741.2 Accepted alive Link to Nucleotide Sequence:NM_001145269.2Link to Protein Sequence:NP_001138741.2Re-query CCDS DB by Nucleotide ID:NM_001145269Re-query CCDS DB by Protein ID:NP_001138741Link to BLAST:NP_001138741.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138741.2 275 Q8N0U4-3 275 100% 0 0

Chromosomal Locations for CCDS 47677.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 102749208 102749417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102757854 102757946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102761273 102761411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102772409 102772450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102777253 102777348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102787335 102787469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102808290 102808402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (828 nt):
ATGCTTGCCCCCTGCTCAGGTTGGGAGCTTGGCTGCTTCCGTCTCTGTCTCCGTCAGGTCCGACTGTGGG
CTGGCGCTGGGCGCTGGGCTTGCTGGGCTTGCCAAGCCAGGCCGTACAGCTCAGGTGGGAGCGAGCGCTG
GCCCGGATCGGAGACTGAGGTCCCTCCGCCTGGCCCGGGGCGCCGAACTCTGAAGGAGTGGACACTGCAG
GGTCAAAAATTGCATGTTCAAACAAAAGGAGGCAAAGTGATCTGTCTGGGAACAGTTTATGGAAATATAG
ATATTCATGCATCAGATAAAAGTGCTGTGACCATAGATAAACTGCAGGGAAGTTCTGTTACTGTATCTAC
CGAAGATGGTTTGCTGAAAGCCAAGTATCTTTATACAGAATCATCATTTCTGTCTTCTGCTGCTGGGGAT
ATTACATTAGGAAGTGTTCATGGTAATATAACATTACAAAGCAAGATGGGTAACATCACAGTAGATTCGT
CTTCTGGATGTCTAAAAGCCTCAACTAATCAGGGTGCCATAGATGTTTATGTCAGCCAACTGGGGAAAGT
GGAATTGAAATCCCATAAAGGTTCTATTATTGTCAAGGTCCCATCTTCACTTCAAGCTCATTTACAGTTA
TCAGGGAAAGAGGTTGATGTGAACTCAGAAGTCCATGTTCAGGAAATGGCTGAAGTTCGTAAAGATGATG
TTGTAACAGTGACTGGACTCATGAATCAAGCAAGCAAACGTGAAAAATGGATTAAGGCTGATGCCCCAAA
AGGCACTGTAAGTTTTAGAAGGCAAAGTTGGTTTCAGTCCCTGAAACTGCAGGACTAA

Translation (275 aa):
MLAPCSGWELGCFRLCLRQVRLWAGAGRWACWACQARPYSSGGSERWPGSETEVPPPGPGRRTLKEWTLQ
GQKLHVQTKGGKVICLGTVYGNIDIHASDKSAVTIDKLQGSSVTVSTEDGLLKAKYLYTESSFLSSAAGD
ITLGSVHGNITLQSKMGNITVDSSSGCLKASTNQGAIDVYVSQLGKVELKSHKGSIIVKVPSSLQAHLQL
SGKEVDVNSEVHVQEMAEVRKDDVVTVTGLMNQASKREKWIKADAPKGTVSFRRQSWFQSLKLQD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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