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Report for CCDS47681.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47681.1 Public Homo sapiens 7 ORC5 24 110 108 CCDS HistoryNCBI Gene:5001Re-query CCDS DB by CCDS ID:47681.1Re-query CCDS DB by GeneID:5001See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47681.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000447452.6 ENSP00000395747.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000447452.6Link to Ensembl Protein Viewer:ENSP00000395747.2Re-query CCDS DB by Nucleotide ID:ENST00000447452Re-query CCDS DB by Protein ID:ENSP00000395747
Original member Current member NCBI NM_181747.4 NP_859531.1 Accepted alive Link to Nucleotide Sequence:NM_181747.4Link to Protein Sequence:NP_859531.1Re-query CCDS DB by Nucleotide ID:NM_181747Re-query CCDS DB by Protein ID:NP_859531Link to BLAST:NP_859531.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_859531.1 324 O43913-2 324 100% 0 0

Chromosomal Locations for CCDS 47681.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 104168375 104168525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104183943 104184033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104184123 104184171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104188251 104188381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104195143 104195254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104197725 104197799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104200758 104200958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104204142 104204234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 104207833 104207904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (975 nt):
ATGCCCCACTTGGAAAACGTGGTGCTTTGTCGCGAGTCTCAAGTGTCCATCTTGCAGTCCTTGTTTGGAG
AGAGACATCATTTCAGCTTTCCATCCATTTTTATTTATGGACATACTGCTAGTGGAAAGACCTATGTAAC
ACAAACGTTGTTGAAAACTTTAGAGCTCCCACATGTGTTTGTGAATTGTGTTGAATGCTTTACATTGAGG
CTGCTTTTGGAACAAATTTTAAACAAATTGAATCATCTTAGTTCTTCAGAGGATGGATGTTCTACTGAAA
TAACCTGTGAAACATTTAATGACTTTGTTCGCTTGTTTAAACAAGTAACCACAGCTGAAAATCTTAAAGA
TCAGACTGTATATATTGTTCTAGATAAAGCAGAGTATCTAAGAGATATGGAAGCAAATCTTTTGCCTGGA
TTTCTTAGATTACAAGAATTGGCTGACAGAAATGTGACTGTTCTCTTTCTCAGTGAAATTGTTTGGGAAA
AGTTTCGTCCAAATACTGGATGCTTTGAGCCGTTTGTCTTATATTTCCCTGATTACAGCATAGGCAACCT
TCAAAAGATCCTGTCCCATGATCATCCTCCAGAGTATTCAGCTGATTTCTATGCTGCCTACATTAACATT
CTTCTTGGAGTTTTCTACACTGTTTGTCGAGATTTGAAAGAGCTCAGACATCTGGCAGTACTTAATTTTC
CTAAATATTGTGAACCCGTGGTTAAAGGAGAAGCAAGTGAACGTGATACTCGCAAACTGTGGAGAAATAT
TGAACCTCATTTGAAGAAAGCTATGCAGACTGTTTATCTCAGGGAAATATCAAGTTCCCAGTGGGAAAAG
CTACAGAAAGATGACACAGATCCGGGGCAACTGAAAGGTATCAGAGGAAGTATTGAGACAGTTACCGGAG
ATACTTCTTCAGCTAATTATCAAGATACTAAAGTTAATACTAAAGAGCATTCAGTCAGGAAATAG

Translation (324 aa):
MPHLENVVLCRESQVSILQSLFGERHHFSFPSIFIYGHTASGKTYVTQTLLKTLELPHVFVNCVECFTLR
LLLEQILNKLNHLSSSEDGCSTEITCETFNDFVRLFKQVTTAENLKDQTVYIVLDKAEYLRDMEANLLPG
FLRLQELADRNVTVLFLSEIVWEKFRPNTGCFEPFVLYFPDYSIGNLQKILSHDHPPEYSADFYAAYINI
LLGVFYTVCRDLKELRHLAVLNFPKYCEPVVKGEASERDTRKLWRNIEPHLKKAMQTVYLREISSSQWEK
LQKDDTDPGQLKGIRGSIETVTGDTSSANYQDTKVNTKEHSVRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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