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Report for CCDS47908.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47908.1 Public Homo sapiens 8 ZFPM2 24 110 108 CCDS HistoryNCBI Gene:23414Re-query CCDS DB by CCDS ID:47908.1Re-query CCDS DB by GeneID:23414See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47908.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000407775.7 ENSP00000384179.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000407775.7Link to Ensembl Protein Viewer:ENSP00000384179.2Re-query CCDS DB by Nucleotide ID:ENST00000407775Re-query CCDS DB by Protein ID:ENSP00000384179
Original member Current member NCBI NM_012082.4 NP_036214.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012082.4Link to Protein Sequence:NP_036214.2Re-query CCDS DB by Nucleotide ID:NM_012082Re-query CCDS DB by Protein ID:NP_036214Link to BLAST:NP_036214.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036214.2 1151 Q8WW38-1 1151 100% 0 0

Chromosomal Locations for CCDS 47908.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 105318942 105318981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105419144 105419302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105444280 105444381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105561363 105561481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105634246 105634357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105788718 105788924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105798724 105798948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 105801047 105803538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3456 nt):
ATGTCCCGGCGAAAGCAAAGCAAACCCCGGCAGATCAAACGGCCGCTTGAAGATGCCATTGAAGATGAGG
AAGAAGAATGTCCATCAGAGGAAACAGACATCATCTCCAAAGGAGACTTTCCATTGGAGGAAAGCTTTTC
CACAGAATTTGGGCCTGAAAATCTGAGCTGCGAAGAAGTGGAATACTTTTGTAACAAAGGTGATGATGAA
GGAATCCAGGAGACAGCAGAATCAGATGGGGACACACAGTCAGAGAAACCGGGGCAACCTGGAGTTGAGA
CAGACGACTGGGATGGACCAGGAGAGCTGGAGGTGTTTCAGAAAGATGGGGAACGAAAAATTCAGAGTCG
ACAGCAACTTCCAGTGGGAACAACCTGGGGGCCGTTTCCTGGGAAGATGGACTTGAATAATAATTCTTTG
AAGACAAAGGCTCAGGTCCCAATGGTGCTGACTGCTGGTCCCAAGTGGTTGCTGGATGTGACTTGGCAAG
GAGTGGAAGACAACAAAAACAACTGCATTGTGTACAGCAAAGGGGGTCAGCTTTGGTGTACAACTACGAA
GGCCATCTCTGAGGGTGAAGAGCTAATTGCCTTTGTGGTGGATTTTGACTCAAGGCTACAAGCTGCCAGT
CAGATGACTCTCACAGAAGGGATGTACCCTGCACGCCTGCTGGACTCAATTCAGCTGCTTCCTCAGCAAG
CTGCCATGGCTTCTATTTTGCCCACAGCTATTGTCAATAAGGATATATTCCCTTGCAAGTCCTGTGGCAT
CTGGTATCGGAGTGAGCGGAATCTGCAGGCCCATTTGATGTACTACTGCAGTGGGAGGCAAAGAGAAGCT
GCTCCGGTGTCAGAGGAAAATGAAGACAGTGCCCATCAGATTTCCAGCCTGTGCCCCTTCCCACAGTGCA
CCAAGAGCTTTTCAAATGCTCGAGCTCTAGAAATGCACCTGAATTCACACAGTGGAGTGAAAATGGAAGA
ATTCCTGCCCCCTGGTGCTAGTCTAAAATGCACCGTCTGTAGCTACACTGCTGATTCCGTGATCAACTTT
CACCAACACCTGTTCTCCCATCTCACTCAAGCTGCCTTCCGATGTAATCACTGCCATTTCGGCTTCCAGA
CTCAGAGGGAGTTATTGCAGCACCAGGAGCTCCATGTCCCTAGCGGCAAACTTCCCAGAGAAAGTGACAT
GGAACACTCTCCAAGTGCAACTGAAGACAGCTTACAGCCAGCCACAGACTTATTGACCAGAAGCGAACTT
CCCCAGAGCCAAAAGGCCATGCAGACTAAAGATGCGAGCTCTGACACAGAGCTGGACAAGTGTGAGAAAA
AGACTCAGCTCTTTCTCACGAACCAGAGACCAGAGATACAGCCTACAACAAATAAACAAAGCTTTTCTTA
CACAAAAATAAAGTCTGAGCCCTCTAGCCCAAGACTTGCCTCATCTCCAGTTCAGCCTAATATTGGGCCT
TCTTTCCCTGTGGGCCCTTTCCTATCTCAGTTTTCTTTCCCCCAAGATATCACCATGGTCCCTCAAGCTT
CAGAGATCTTAGCTAAGATGTCTGAACTGGTGCATCGGCGACTGAGGCATGGCAGTAGTAGCTACCCTCC
CGTCATTTACAGCCCTTTGATGCCCAAGGGGGCTACTTGTTTTGAGTGTAACATAACATTCAATAATTTG
GATAATTATCTAGTGCACAAAAAGCATTATTGCAGCAGCCGATGGCAGCAGATGGCTAAGTCCCCAGAGT
TCCCTAGTGTGTCAGAAAAGATGCCTGAAGCTTTGAGTCCCAACACTGGCCAAACCTCCATAAACCTTCT
CAACCCAGCTGCTCATTCTGCTGATCCTGAGAATCCACTTCTTCAAACATCTTGCATCAATTCTTCCACT
GTCTTAGATTTAATTGGGCCAAATGGGAAGGGCCATGACAAGGACTTTTCCACTCAAACTAAGAAGCTCT
CCACCTCCAGTAACAATGATGACAAAATTAATGGAAAACCTGTTGATGTGAAAAATCCCAGTGTCCCCTT
AGTGGATGGGGAAAGTGACCCAAATAAGACTACCTGTGAAGCTTGCAACATTACCTTCAGCCGGCACGAA
ACATACATGGTCCACAAACAGTATTACTGTGCTACACGCCACGACCCTCCACTGAAGAGGTCTGCTTCCA
ACAAAGTGCCTGCCATGCAGAGAACCATGCGCACACGCAAGCGCAGAAAGATGTATGAGATGTGCCTACC
TGAGCAGGAACAAAGGCCTCCACTGGTTCAGCAGAGATTTCTTGACGTAGCCAACCTCAATAATCCTTGT
ACCTCCACTCAAGAACCCACAGAAGGGCTAGGAGAGTGCTACCACCCAAGATGTGATATCTTTCCAGGAA
TTGTCTCTAAACACTTGGAAACTTCTCTGACGATCAACAAGTGTGTTCCAGTTTCCAAATGTGATACTAC
TCATTCCAGTGTTTCCTGCCTAGAGATGGACGTGCCCATAGATCTCAGCAAAAAGTGTTTATCTCAGTCT
GAGCGGACGACCACGTCTCCCAAAAGGCTGCTGGACTATCACGAGTGCACTGTGTGCAAGATCAGTTTCA
ATAAGGTAGAAAACTATCTGGCCCACAAGCAGAATTTCTGCCCGGTTACTGCACATCAGCGTAATGACCT
GGGTCAACTGGACGGCAAAGTGTTTCCGAATCCAGAAAGCGAACGAAACAGCCCTGATGTCAGCTACGAA
AGAAGCATAATAAAATGTGAGAAAAATGGGAATTTGAAGCAGCCTTCCCCCAATGGAAACTTATTTTCAT
CCCACCTAGCAACCCTGCAAGGCTTGAAGGTCTTTAGTGAAGCTGCTCAGCTCATTGCTACAAAAGAAGA
AAACAGACATTTGTTTCTTCCACAATGCCTTTACCCTGGAGCAATAAAGAAAGCAAAAGGAGCCGACCAG
CTTTCTCCATATTATGGAATCAAGCCAAGTGATTATATTTCTGGTTCTCTTGTCATCCATAACACTGACA
TCGAGCAAAGCAGAAATGCAGAAAATGAATCTCCTAAAGGCCAGGCTTCCTCAAATGGGTGTGCTGCGCT
GAAGAAAGATTCTCTGCCATTGTTGCCCAAAAATCGAGGAATGGTAATAGTGAATGGTGGACTGAAACAA
GATGAGAGACCTGCTGCCAACCCACAGCAAGAGAACATTTCCCAGAATCCTCAGCACGAAGACGACCACA
AATCTCCCTCGTGGATCTCTGAGAACCCATTAGCTGCCAATGAGAATGTCTCACCAGGAATTCCCTCAGC
AGAGGAACAGTTGTCTAGTATAGCAAAAGGTGTGAATGGTTCCAGCCAGGCTCCAACCAGTGGGAAATAT
TGCCGGCTATGTGATATCCAGTTCAACAACCTTTCAAACTTTATAACTCACAAGAAGTTTTATTGCTCAT
CACATGCAGCAGAACATGTCAAATGA

Translation (1151 aa):
MSRRKQSKPRQIKRPLEDAIEDEEEECPSEETDIISKGDFPLEESFSTEFGPENLSCEEVEYFCNKGDDE
GIQETAESDGDTQSEKPGQPGVETDDWDGPGELEVFQKDGERKIQSRQQLPVGTTWGPFPGKMDLNNNSL
KTKAQVPMVLTAGPKWLLDVTWQGVEDNKNNCIVYSKGGQLWCTTTKAISEGEELIAFVVDFDSRLQAAS
QMTLTEGMYPARLLDSIQLLPQQAAMASILPTAIVNKDIFPCKSCGIWYRSERNLQAHLMYYCSGRQREA
APVSEENEDSAHQISSLCPFPQCTKSFSNARALEMHLNSHSGVKMEEFLPPGASLKCTVCSYTADSVINF
HQHLFSHLTQAAFRCNHCHFGFQTQRELLQHQELHVPSGKLPRESDMEHSPSATEDSLQPATDLLTRSEL
PQSQKAMQTKDASSDTELDKCEKKTQLFLTNQRPEIQPTTNKQSFSYTKIKSEPSSPRLASSPVQPNIGP
SFPVGPFLSQFSFPQDITMVPQASEILAKMSELVHRRLRHGSSSYPPVIYSPLMPKGATCFECNITFNNL
DNYLVHKKHYCSSRWQQMAKSPEFPSVSEKMPEALSPNTGQTSINLLNPAAHSADPENPLLQTSCINSST
VLDLIGPNGKGHDKDFSTQTKKLSTSSNNDDKINGKPVDVKNPSVPLVDGESDPNKTTCEACNITFSRHE
TYMVHKQYYCATRHDPPLKRSASNKVPAMQRTMRTRKRRKMYEMCLPEQEQRPPLVQQRFLDVANLNNPC
TSTQEPTEGLGECYHPRCDIFPGIVSKHLETSLTINKCVPVSKCDTTHSSVSCLEMDVPIDLSKKCLSQS
ERTTTSPKRLLDYHECTVCKISFNKVENYLAHKQNFCPVTAHQRNDLGQLDGKVFPNPESERNSPDVSYE
RSIIKCEKNGNLKQPSPNGNLFSSHLATLQGLKVFSEAAQLIATKEENRHLFLPQCLYPGAIKKAKGADQ
LSPYYGIKPSDYISGSLVIHNTDIEQSRNAENESPKGQASSNGCAALKKDSLPLLPKNRGMVIVNGGLKQ
DERPAANPQQENISQNPQHEDDHKSPSWISENPLAANENVSPGIPSAEEQLSSIAKGVNGSSQAPTSGKY
CRLCDIQFNNLSNFITHKKFYCSSHAAEHVK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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