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Report for CCDS47981.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47981.1 Public Homo sapiens 9 NMRK1 24 110 108 CCDS HistoryNCBI Gene:54981Re-query CCDS DB by CCDS ID:47981.1Re-query CCDS DB by GeneID:54981See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47981.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376808.8 ENSP00000366004.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000376808.8Link to Ensembl Protein Viewer:ENSP00000366004.4Re-query CCDS DB by Nucleotide ID:ENST00000376808Re-query CCDS DB by Protein ID:ENSP00000366004
Original member Current member NCBI NM_001127603.2 NP_001121075.1 Accepted alive Link to Nucleotide Sequence:NM_001127603.2Link to Protein Sequence:NP_001121075.1Re-query CCDS DB by Nucleotide ID:NM_001127603Re-query CCDS DB by Protein ID:NP_001121075Link to BLAST:NP_001121075.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001121075.1 175 Q9NWW6-2 175 100% 0 0

Chromosomal Locations for CCDS 47981.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 75061548 75061567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75066757 75066840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75068996 75069102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75069895 75070042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75077159 75077207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75077490 75077580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 75083087 75083115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (528 nt):
ATGAAAACATTTATCATTGGAATCAGTGGTGTGACAAACAGTGGCAAAACAACACTGGCTAAGAATTTGC
AGAAACACCTCCCAAATTGCAGTGTCATATCTCAGGATGATTTCTTCAAGCCAGAGTCTGAGATAGAGAC
AGATAAAAATGGATTTTTGCAGTACGATGTGCTTGAAGCACTTAACATGGAAAAAATGATGTCAGCCATT
TCCTGCTGGATGGAAAGCGCAAGACACTCTGTGGTATCAACAGACCAGGAAAGTGCTGAGGAAATTCCCA
TTTTAATCATCGAAGGTTTTCTTCTTTTTAATTATAATACAAGGGTCTATCAGCCTCCAGACTCTCCGGG
ATACTTTGATGGCCATGTGTGGCCCATGTATCTAAAGTACAGACAAGAAATGCAGGACATCACATGGGAA
GTTGTGTACCTGGATGGAACAAAATCTGAAGAGGACCTCTTTTTGCAAGTATATGAAGATCTAATACAAG
AACTAGCAAAGCAAAAGTGTTTGCAAGTGACAGCATAA

Translation (175 aa):
MKTFIIGISGVTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEALNMEKMMSAI
SCWMESARHSVVSTDQESAEEIPILIIEGFLLFNYNTRVYQPPDSPGYFDGHVWPMYLKYRQEMQDITWE
VVYLDGTKSEEDLFLQVYEDLIQELAKQKCLQVTA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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