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Report for CCDS48280.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48280.1 Public Mus musculus 1 Creb1 23 108 98 CCDS HistoryNCBI Gene:12912Re-query CCDS DB by CCDS ID:48280.1Re-query CCDS DB by GeneID:12912See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48280.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000171164.7 ENSMUSP00000132860.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000171164.7Link to Ensembl Protein Viewer:ENSMUSP00000132860.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000171164Re-query CCDS DB by Protein ID:ENSMUSP00000132860
Original member Current member NCBI NM_001037726.1 NP_001032815.1 Accepted alive Link to Nucleotide Sequence:NM_001037726.1Link to Protein Sequence:NP_001032815.1Re-query CCDS DB by Nucleotide ID:NM_001037726Re-query CCDS DB by Protein ID:NP_001032815Link to BLAST:NP_001032815.1

Chromosomal Locations for CCDS 48280.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 64558509 64558649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 64566217 64566317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 64570134 64570276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 64574073 64574255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 64576179 64576329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 64597234 64597378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (864 nt):
ATGCCAGCAGCTCATGCAACATCATCTGCTCCCACTGTAACCTTAGTGCAGCTGCCCAATGGGCAGACAG
TCCAGGTCCATGGCGTTATCCAGGCGGCCCAGCCATCAGTTATCCAGTCTCCACAAGTCCAAACAGTTCA
GATTTCAACTATTGCAGAAAGTGAAGATTCACAGGAGTCTGTGGATAGTGTAACTGATTCCCAAAAACGA
AGGGAAATCCTTTCAAGGAGGCCTTCCTACAGGAAAATTTTGAATGACTTATCTTCTGATGCACCAGGGG
TGCCAAGGATTGAAGAAGAAAAGTCAGAAGAGGAGACTTCAGCCCCTGCCATCACCACTGTAACAGTGCC
AACCCCCATTTACCAAACTAGCAGTGGGCAGTACATTGCCATTACCCAGGGAGGAGCAATACAGCTGGCT
AACAATGGTACGGATGGGGTACAGGGCCTGCAGACATTAACCATGACCAATGCAGCTGCCACTCAGCCGG
GTACTACCATTCTACAGTATGCACAGACCACTGATGGACAGCAGATTCTAGTGCCCAGCAACCAAGTTGT
TGTTCAAGCTGCCTCAGGCGATGTACAAACATACCAGATCCGCACAGCACCCACGAGCACCATTGCCCCT
GGAGTTGTTATGGCGTCCTCCCCAGCACTTCCTACACAGCCTGCTGAAGAAGCAGCACGGAAGAGAGAGG
TCCGTCTAATGAAGAACAGGGAGGCAGCAAGAGAATGTCGTAGAAAGAAGAAAGAATATGTGAAATGTTT
AGAGAACAGAGTGGCAGTGCTTGAAAACCAAAACAAAACATTGATTGAGGAGCTAAAAGCACTTAAGGAC
CTTTACTGCCACAAATCAGATTAA

Translation (287 aa):
MPAAHATSSAPTVTLVQLPNGQTVQVHGVIQAAQPSVIQSPQVQTVQISTIAESEDSQESVDSVTDSQKR
REILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQGGAIQLA
NNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQVVVQAASGDVQTYQIRTAPTSTIAP
GVVMASSPALPTQPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKD
LYCHKSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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