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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS48862.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
48862.1 |
Public |
Mus musculus |
11 |
Rhot1 |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Provisional (this record has not been manually reviewed by the collaboration) Sequence IDs included in CCDS 48862.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000055056.15 |
ENSMUSP00000057669.9 |
Accepted |
alive |
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NCBI |
NM_001163355.2 |
NP_001156827.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001156827.1 |
672 |
Q8BG51-3 |
672 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 48862.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2019 nt): ATGCGTGCGGGCCGAGTGCGGCCCCTGCGAGCCTCCGACATGAAGAAAGACGTGAGGATCCTGCTGGTGG GAGAACCTCGAGTTGGGAAGACATCACTGATTATGTCGCTGGTCAGTGAAGAATTTCCGGAAGAGGTTCC TCCCCGAGCAGAAGAAATCACCATTCCAGCTGACGTCACCCCTGAAAGAGTTCCAACACACATTGTCGAT TATTCAGAAGCAGAACAGAGTGATGAACAACTTCATCAAGAAATATCACAGGCTAATGTTATCTGCATAG TTTATGCTGTTAACAACAAACATTCTATTGATAAGGTAACAAGCCGATGGATTCCTCTCATAAATGAAAG AACAGACAAAGACAGCAGGCTGCCTTTGATATTGGTTGGGAACAAATCTGATCTGGTGGAATATAGTAGT ATGGAGACCATCCTTCCAATTATGAACCAGTATACAGAGATAGAGACCTGTGTGGAGTGTTCAGCAAAAA ACCTAAAGAATATCTCAGAGCTGTTTTATTATGCACAGAAAGCTGTTCTTCATCCTACAGGGCCTCTATA CTGCCCAGAGGAGAAAGAGATGAAACCGGCTTGTATAAAGGCCCTCACTCGTATATTTAAAATATCTGAT CAGGATAACGACGGCACTCTGAATGATGCTGAGCTCAACTTCTTCCAGAGAATTTGTTTCAACACTCCTT TAGCTCCGCAAGCGCTGGAAGATGTCAAGAATGTGGTTAGAAAGCACTTAAGTGACGGTGTGGCTGACAG TGGGCTGACGCTCAGAGGTTTTCTCTTTTTACATACACTTTTTATCCAGAGGGGGAGGCATGAGACTACT TGGACTGTGCTTCGACGATTTGGTTATGACGATGACCTGGACCTGACGCCTGAGTATTTATTCCCCCTGC TAAAAATACCTCCTGATTGCACTACTGAATTAAATCATCATGCATATTTGTTTCTCCAGAGCACCTTTGA CAAACATGATTTGGACAGAGACTGTGCTTTGTCGCCTGATGAACTTAAAGATTTATTTCAAGTTTTTCCT TACATACCTTGGGGACCAGATGTAAATAACACAGTTTGCACAAATGAAAGAGGCTGGATAACCTACCAGG GGTTCCTCTCCCAGTGGACGCTCACCACCTACTTAGATGTGCAGCGTTGCCTGGAGTATTTGGGATATCT AGGCTATTCCATACTGACGGAACAAGAGTCTCAAGCTTCAGCCATTACAGTAACAAGGGATAAAAAGATT GACCTGCAGAAAAAACAGACTCAGAGAAATGTGTTCAGGTGTAATGTAATTGGAGTGAAAGGCTGTGGGA AAACTGGAGTTCTTCAGTCTCTCCTTGGAAGAAACCTAATGAGGCAGAAGAAAATTCGTGATGATCATAA GTCCTATTATGCAATTAACACTGTCTATGTATATGGACAAGAGAAATACTTGTTGCTGCACGATATCTCA GAGTCGGAATTTCTAACTGAGGCTGAGACCATTTGTGATGTTGTATGCCTGGTATATGATGTCACCAATC CCAAATCCTTTGAATACTGTGCCAGGATTTTTAAGCAACATTTTATGGACAGCAGAATTCCCTGCTTGAT TGTAGCTGCAAAGTCAGACCTGCATGAAGTCAAACAGGAACATAGCATCTCACCTACTGATTTCTGCAGG AAACACAAAATGCCTCCACCTCAAGCCTTCACTTGCAATACTGCTGATGCCCCCAGTAAGGATATCTTTG TTAAGTTGACAACAATGGCCATGTACCCCCATGCCCGGTTACGCTGCATGTGCACCTGCAACAGGTGTAC ATTTTGCATCTGTCAGAACTTCCTCAACTCAGACTTGCTGCAATCTGTAAAGAACAAAATCTTCACTGCA GTTCTTAACAGGCACGTGACACAAGCTGACCTCAAGAGCTCAACGTTCTGGCTTCGCGCAAGCTTTGGTG CTACGGTCTTTGCAGTCGTGGGCTTTGCTATGTACAGAGCACTACTGAAACAGCGATGA
Translation (672 aa): MRAGRVRPLRASDMKKDVRILLVGEPRVGKTSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVD YSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDKDSRLPLILVGNKSDLVEYSS METILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISD QDNDGTLNDAELNFFQRICFNTPLAPQALEDVKNVVRKHLSDGVADSGLTLRGFLFLHTLFIQRGRHETT WTVLRRFGYDDDLDLTPEYLFPLLKIPPDCTTELNHHAYLFLQSTFDKHDLDRDCALSPDELKDLFQVFP YIPWGPDVNNTVCTNERGWITYQGFLSQWTLTTYLDVQRCLEYLGYLGYSILTEQESQASAITVTRDKKI DLQKKQTQRNVFRCNVIGVKGCGKTGVLQSLLGRNLMRQKKIRDDHKSYYAINTVYVYGQEKYLLLHDIS ESEFLTEAETICDVVCLVYDVTNPKSFEYCARIFKQHFMDSRIPCLIVAAKSDLHEVKQEHSISPTDFCR KHKMPPPQAFTCNTADAPSKDIFVKLTTMAMYPHARLRCMCTCNRCTFCICQNFLNSDLLQSVKNKIFTA VLNRHVTQADLKSSTFWLRASFGATVFAVVGFAMYRALLKQR
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