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Report for CCDS49133.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49133.1 Public Mus musculus 12 Eif1ad7 23 108 98 CCDS HistoryNCBI Gene:435337Re-query CCDS DB by CCDS ID:49133.1Re-query CCDS DB by GeneID:435337See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49133.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000101168.3 ENSMUSP00000098728.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000101168.3Link to Ensembl Protein Viewer:ENSMUSP00000098728.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000101168Re-query CCDS DB by Protein ID:ENSMUSP00000098728
Original member Current member NCBI NM_001013824.3 NP_001013846.1 Accepted alive Link to Nucleotide Sequence:NM_001013824.3Link to Protein Sequence:NP_001013846.1Re-query CCDS DB by Nucleotide ID:NM_001013824Re-query CCDS DB by Protein ID:NP_001013846Link to BLAST:NP_001013846.1

Chromosomal Locations for CCDS 49133.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 88271554 88271988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (435 nt):
ATGCCAAAGAATAAAGGCAAAGGAGGCAAAAACAGGCGCAGAGGTAAAAATGAAAATGAATCAGAGAAAA
GAGAGTTGGTGTTTAAAGAATATGGGCAAGAGTATGCTCAGGTGACCAAAATGCTGGGATGTGGACGGTT
GGAAGCAATGTGTTTTGATGGTGTAAGGAGGCTGTGCCACATAAGAGGGAAGTTGAGAAAAAAGGTTTGG
ATAAATACCTCAGACATTATATTGATTGGTCTAAGAGACTATCAAGATAACAAAGCTGATATAATATTAA
AGTACAATCCAGATGAAGCAAGAAGTCTGAAGGCCTATGGAGAACTTCCAGAACATGCCAAAATCAATGA
AATGGACACATTTGGTGCTGGGGATGATGATGAAATCGTGTTTGATGATATTGGAGAGGATGATGAAGAC
ATTGATGATATCTAA

Translation (144 aa):
MPKNKGKGGKNRRRGKNENESEKRELVFKEYGQEYAQVTKMLGCGRLEAMCFDGVRRLCHIRGKLRKKVW
INTSDIILIGLRDYQDNKADIILKYNPDEARSLKAYGELPEHAKINEMDTFGAGDDDEIVFDDIGEDDED
IDDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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