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Report for CCDS49192.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49192.1 Public Mus musculus 12 Clba1 23 108 98 CCDS HistoryNCBI Gene:217887Re-query CCDS DB by CCDS ID:49192.1Re-query CCDS DB by GeneID:217887See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 49192.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000037014.10 ENSMUSP00000038002.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000037014.10Link to Ensembl Protein Viewer:ENSMUSP00000038002.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000037014Re-query CCDS DB by Protein ID:ENSMUSP00000038002
Original member Current member EBI ENSMUST00000177808.2 ENSMUSP00000137263.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000177808.2Link to Ensembl Protein Viewer:ENSMUSP00000137263.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000177808Re-query CCDS DB by Protein ID:ENSMUSP00000137263
Original member Current member NCBI NM_145450.3 NP_663425.2 Accepted alive Link to Nucleotide Sequence:NM_145450.3Link to Protein Sequence:NP_663425.2Re-query CCDS DB by Nucleotide ID:NM_145450Re-query CCDS DB by Protein ID:NP_663425Link to BLAST:NP_663425.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663425.2 321 Q8BHN9 321 100% 0 0

Chromosomal Locations for CCDS 49192.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 112809389 112809808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112810874 112811010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112812183 112812312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112814463 112814579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 112815549 112815710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (966 nt):
ATGCAAGGCGGGCAGGAGGTGGGGAGAGAGTCAGTGAGTGACCTCGCAGAGGAGCCTGGAGAGGGGTCCC
CCCACCAGACAGCTAGAGGACAGAGTGGTGATGGTTTGGAACGGAGGCGGATCTGCTGCGACGGTCCCGT
GGTTCTGCCGGACACGAACGCTAACAGCTCCAGGCTGGATGAGGGTCTTCCCACCAGCTGTCCACACCCG
GGGGAGCTCAGCGGCGGGTGGGGAGAGTTCGAAGGCTTCCGGGAGTCTTCAGCTAAGTCGGAGCAGTTTT
CTCAGTCTTTTGAACTCCTGGGGAGAGCCACGGAATGTCAGCCGCTGAGAACCCCTTCAGTCCCCGAAGA
GGGCAGTTCTTGCCAGGTGCAGCAGGGTGGACCCTGGGTGACAGGAACTGCTGCTGGCCCATCTTCAGAG
TCCATTCCCAGCTATGAGAAGGTTTTTAGGCTTGCGTTTCAAGAAGTCGCCGTGGAACAGGCTCCTGAAG
ACGTTTGCTCCCTGGACCATTTCTTGGAAAGAAGCAATGAAGGGGCTGCATCTGTGCCGAGACTCTGTTC
TGAATCTAGGAAGCTCTGGAGAGCCCTGCAGAACACCGACACTGCGTCTGCTTCGAGGTGTCTCTGGGGC
GAATCTCACTGTCGGGAAAACCTCCTTCCTGTGCTTGGTGTAGACGCTGCTCAGAAGAGCCCCCCTGGAG
GCCAGGGTCATGTCCTGGAAGGTTCTGACTTGAGAAAACCTGAAGAGCTGCTGGCTGTCAGCGGTTTCCA
CCTGCACCACTGCAAAGCCCTGATTCAGACCAAGCTCTCAGGGACGTCCAGTAGCAGACAGGGCAGCCTG
ATTACCTACAGCCTGTTTCTGAAGACACCGCTCCAAGGGAACGGGCGCTACATCACCATTCCACAAAAAA
AGATCTTTACTCCACGCAACCTGAAAATGGCATTCTTTAATAATGATGTCTGCTAA

Translation (321 aa):
MQGGQEVGRESVSDLAEEPGEGSPHQTARGQSGDGLERRRICCDGPVVLPDTNANSSRLDEGLPTSCPHP
GELSGGWGEFEGFRESSAKSEQFSQSFELLGRATECQPLRTPSVPEEGSSCQVQQGGPWVTGTAAGPSSE
SIPSYEKVFRLAFQEVAVEQAPEDVCSLDHFLERSNEGAASVPRLCSESRKLWRALQNTDTASASRCLWG
ESHCRENLLPVLGVDAAQKSPPGGQGHVLEGSDLRKPEELLAVSGFHLHHCKALIQTKLSGTSSSRQGSL
ITYSLFLKTPLQGNGRYITIPQKKIFTPRNLKMAFFNNDVC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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