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Report for CCDS49302.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49302.1 Public Mus musculus 13 Zfp874b 23 108 98 CCDS HistoryNCBI Gene:408067Re-query CCDS DB by CCDS ID:49302.1Re-query CCDS DB by GeneID:408067See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49302.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000019572.8 ENSMUSP00000019572.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000019572.8Link to Ensembl Protein Viewer:ENSMUSP00000019572.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000019572Re-query CCDS DB by Protein ID:ENSMUSP00000019572
Original member Current member NCBI NM_001076791.2 NP_001070259.1 Accepted alive Link to Nucleotide Sequence:NM_001076791.2Link to Protein Sequence:NP_001070259.1Re-query CCDS DB by Nucleotide ID:NM_001076791Re-query CCDS DB by Protein ID:NP_001070259Link to BLAST:NP_001070259.1

Chromosomal Locations for CCDS 49302.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 67473834 67474951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67481170 67481262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67481719 67481845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67484141 67484146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1344 nt):
ATGGAGGAAATGCTGTCCTTCCGGGATGTGGCCATTGATTTTTCTCCAGAAGAGAGGGACTACCTGGGTC
CTGCTCAGTGGGATCTGTACAGAGACGTGATGCTGGAGAATTATAGCCACCTTGTGTTCCTGGGTCTTGC
TGTTGCTAAGCCATACTTGGTAACATTTCTGGAGCAAAACCAAGGGTCTTCAGGTGTGAAAAGCCACGCA
GCAGCCACCATCCCAGGAACAACAGGCAATGAATTTAACAATCACAATGAGGCCATTGATCACAGCTCTC
TAAGTATGCAATGCCAGAGAATTCATACAGGAGAGGAACCCTACTACTTTGAAGACTGTGGTAAGGCCCT
TAGTTCTCAGGCAACACTTTCTGTACTCCAGAGACGTTATAGTGGAGACAAACCCTACAAGTGTAAAGAA
TGTCATAAAACACTTAGCAGTCGCTCATCACTTTTAATACACCAGAAATATCATACTGATGAGAAAACCT
ACAAGTGTGAAAAATGTGGCAAACGGTTTTTGCGTTCCTCACATCTTCAGCATCATCAAAAAATTCATAC
TGGAGAGAAACCATACAAATGTGAAGAGTGTGACAAAGCCTTTCTTCATCACTCATATCTTAGGAAACAC
CAGGCAGTTCATACTGGAGAGAAACCCTACAAGTGTGAAGAGTGTGGAAATTCATTTTACTATCCTGCAA
TGCTGAAGCAACATCAAAGAATTCATTCTGGAGAGAAACTTGACAAGTGTGAAGAATGTGGGAAAGTATT
TTCCTCTGCTTTCTTTCTTAACCAGCATAAAGGAATTGATTCCATAGAGAAAAGGTACAAGTGTCAAGAA
TGTGGCAAATCTTTTTGCTATCGTTCATATCTTAGGGAACATTACAGAAGGCATTCTGGAGAGTATCCCT
ACAAGTGCGAAGAATGTGGCAAAGGGTTTTCCCGTTCCTCAAAGCTTCAGGAACATCAAACAATTCATAC
TGGAGTTAAACCTTACAAGTGTGAAGAGTGTGAGAAATGTTTTTCCTCTTTTACGTCCCTTAAAAGACAT
CAAATCATCCATTCTGAAGATACTCCCCATGAGTGTGTAGAATGCGGCAAAAGGTTTTCTAGTTCTTCCC
GCCTTCAGGAACATCAGAAAATTCACACTGAAGAGAAACCATACAAATGTGAGGAATGTGACAAAGCCTT
TCTTTATCACTCGTTTCTTAGGAGACACAGAGCAGTTCATACTAGAGAGAAACCCTACACGTGTGAAGAG
TGTGGGAAATGTTATACCTCTTTCACATCCCTGAAAAGACATCAAACAATTCATTCTGTAGACACTCCCC
ATGAGTGGGTATAA

Translation (447 aa):
MEEMLSFRDVAIDFSPEERDYLGPAQWDLYRDVMLENYSHLVFLGLAVAKPYLVTFLEQNQGSSGVKSHA
AATIPGTTGNEFNNHNEAIDHSSLSMQCQRIHTGEEPYYFEDCGKALSSQATLSVLQRRYSGDKPYKCKE
CHKTLSSRSSLLIHQKYHTDEKTYKCEKCGKRFLRSSHLQHHQKIHTGEKPYKCEECDKAFLHHSYLRKH
QAVHTGEKPYKCEECGNSFYYPAMLKQHQRIHSGEKLDKCEECGKVFSSAFFLNQHKGIDSIEKRYKCQE
CGKSFCYRSYLREHYRRHSGEYPYKCEECGKGFSRSSKLQEHQTIHTGVKPYKCEECEKCFSSFTSLKRH
QIIHSEDTPHECVECGKRFSSSSRLQEHQKIHTEEKPYKCEECDKAFLYHSFLRRHRAVHTREKPYTCEE
CGKCYTSFTSLKRHQTIHSVDTPHEWV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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