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Report for CCDS49418.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49418.1 Public Mus musculus 14 E330034G19Rik 23 108 98 CCDS HistoryNCBI Gene:105418Re-query CCDS DB by CCDS ID:49418.1Re-query CCDS DB by GeneID:105418See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49418.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000161740.8 ENSMUSP00000124917.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000161740.8Link to Ensembl Protein Viewer:ENSMUSP00000124917.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000161740Re-query CCDS DB by Protein ID:ENSMUSP00000124917
Original member Current member NCBI NM_001033214.2 NP_001028386.1 Accepted alive Link to Nucleotide Sequence:NM_001033214.2Link to Protein Sequence:NP_001028386.1Re-query CCDS DB by Nucleotide ID:NM_001033214Re-query CCDS DB by Protein ID:NP_001028386Link to BLAST:NP_001028386.1

Chromosomal Locations for CCDS 49418.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24293419 24293587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24295997 24296138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24296763 24296946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24297982 24298097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24306814 24306997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24308202 24308317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24309434 24309578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1056 nt):
ATGTCACCAGTGTTGTGGCAACAACAACTGCTCTTAGAGCATTCCATCAGTACTTCAGAGTTCATCTCGA
ATCATGTTTTCAATGCTGAGGAGCAGAGTAAGGTAGAAGGAAGCTGGACCTCCATCTCAGTGCAATCCAG
CAAGGAAGAAGTGGTTCTGGGAAGACCCGCTCCTACCACAGGCCAACTACATTTTATGAGAAATTGCATT
TGCAACATAAGACACCATGTCACAGCTGCAGACCTGAACAGGAAAACCACTGAGGCCTCCAAGAACTTGA
AGATGCTTGAGGAGGAGATTGGCTTCTATCGCAACCTGCACAGCCAGCTGAGGATGGCCCAGGCTCAGCT
GAAGAACAAGGTGAATATGCTGAAGCAGGAAAATAGGAGAATTTGGGGGCGATGTGCCACACTGCAGCAG
AACTTGGAGGAATTGAAAATGATCTATAAGAATCAACTGGAGGACACCAGTGACCCCCAGACCCAGCAGC
AGCAGGATCCAGAAAGAACGGAGGAATTGCTGCAGGACAGTCACAAGCAGAAGAAGCTGGGCATCCAAGA
GAAGAATTTAGCAGAAAAACAGCAGTATTACTTTGAGGTGCGCCGGAAGAGCCACCTGTACAGCTGCTTC
CTGACAGAGCTGAATCAGTTGAAGAAGAAGCTGGAAATGCTGAGTCAGGAAAACAAGGAAATGCAGGGGG
ATTGTGCCCTACTACAGCATCACGTGGAGGACTTGAAACCAATCTATAAGAAGCAACAGGAGGAGGACAG
TGACCTCCAGACCCAGCACCAAAAGCACATGGAAAGGATGGAGGAAAAGCTGCAGTACATGCTGAAGAAG
AAGAATATGGCCATCAAGCAAAGGGAGTTGGCAGAAAAGCTGAAGTACCAATTTGAGGTCCTGCAAATGA
GGTTTGATAAATTGCAGCAAGAGATGGAACTGGCCATAGCCCAGGAAGAGAGAGTCCTGCAGAAAGACCT
GCTACATCAGGAGCCCCCTGCTGAGCCCCATCCCCAGAAACCACAGGATCCCTTGGGTGGGTTTGCTTTA
ACATAG

Translation (351 aa):
MSPVLWQQQLLLEHSISTSEFISNHVFNAEEQSKVEGSWTSISVQSSKEEVVLGRPAPTTGQLHFMRNCI
CNIRHHVTAADLNRKTTEASKNLKMLEEEIGFYRNLHSQLRMAQAQLKNKVNMLKQENRRIWGRCATLQQ
NLEELKMIYKNQLEDTSDPQTQQQQDPERTEELLQDSHKQKKLGIQEKNLAEKQQYYFEVRRKSHLYSCF
LTELNQLKKKLEMLSQENKEMQGDCALLQHHVEDLKPIYKKQQEEDSDLQTQHQKHMERMEEKLQYMLKK
KNMAIKQRELAEKLKYQFEVLQMRFDKLQQEMELAIAQEERVLQKDLLHQEPPAEPHPQKPQDPLGGFAL
T


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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