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Report for CCDS49797.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49797.1 Public Mus musculus 16 Igf2bp2 23 108 98 CCDS HistoryNCBI Gene:319765Re-query CCDS DB by CCDS ID:49797.1Re-query CCDS DB by GeneID:319765See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49797.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100052.10 ENSMUSP00000097629.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100052.10Link to Ensembl Protein Viewer:ENSMUSP00000097629.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000100052Re-query CCDS DB by Protein ID:ENSMUSP00000097629
Original member Current member NCBI NM_183029.2 NP_898850.2 Accepted alive Link to Nucleotide Sequence:NM_183029.2Link to Protein Sequence:NP_898850.2Re-query CCDS DB by Nucleotide ID:NM_183029Re-query CCDS DB by Protein ID:NP_898850Link to BLAST:NP_898850.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_898850.2 592 Q5SF07-1 592 100% 0 0

Chromosomal Locations for CCDS 49797.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 22060793 22060885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22061860 22061973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22063582 22063713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22065093 22065167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22068143 22068259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22070307 22070375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22076017 22076145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22078616 22078751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22079484 22079606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22080067 22080201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22081734 22081985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22083924 22083987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22087528 22087579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22089062 22089110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22161246 22161306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 22162786 22162963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1779 nt):
ATGATGAACAAGCTGTACATTGGGAACCTGAGCCCCGCCGTCACCGCCGACGACCTCCGGCAGCTCTTCG
GGGACAGGAAGCTGCCCCTGGCGGGACAGGTCCTACTCAAGTCCGGCTACGCCTTCGTGGACTACCCCGA
CCAGAACTGGGCCATCCGCGCCATCGAGACCCTCTCGGGTAAAGTGGAATTGCATGGGAAAATCATGGAA
GTTGACTACTCAGTCTCTAAAAAGCTAAGGAGCAGAAGAATCCAGATTCGGAACATCCCGCCTCACCTGC
AGTGGGAGGTGTTGGATGGGCTGTTGGCTGAATATGGGACAGTGGAGAACGTGGAGCAAGTCAACACAGA
TACAGAAACTGCCGTTGTCAACGTCACCTATATGACAAGAGAAGAGGCAAAGCTAGCTATTGAGAAGCTC
AGTGGGCATCAGTTTGAGGACTACTCCTTCAAGATTTCCTACATCCCCGATGAAGAGGTGAGCTCTCCTT
CACCCCCTCATCGTGCCCGGGAACAAGGCCACGGCCCCGGGAGCTCTTCTCAGGCCAGACAGATTGATTT
CCCGCTGCGGATCCTGGTCCCCACCCAGTTTGTTGGTGCCATCATCGGAAAGGAGGGCTTGACCATAAAG
AACATCACTAAGCAGACCCAGTCCCGGGTAGACATCCACAGAAAGGAGAACTCTGGGGCTGCAGAGAAGC
CTGTCACAATCCATGCTACCCCAGAAGGGACATCTGAAGCATGCCGCATGATTCTTGAGATTATGCAAAA
AGAAGCTGATGAGACCAAACTGGCTGAGGAGGTTCCTCTGAAAATCCTGGCCCACAATGGCTTCGTTGGA
AGACTGATTGGCAAAGAAGGCAGAAACCTGAAGAAAATAGAACATGAGACAGGGACCAAGATAACCATCT
CATCCTTGCAGGATTTGAGCATTTATAACCCCGAGAGAACCATCACCGTGAGGGGCACCATTGAAGCCTG
TGCCAATGCTGAGATAGAGATTATGAAGAAGCTCCGAGAGGCCTTTGAGAACGACATGCTGGCCGTTAAC
CAACAAGCCAATCTGATCCCAGGGCTAAACCTCAGTGCACTTGGCATCTTTTCGACTGGACTGTCTGTGC
TTCCTCCACCAGCAGGGCCCCGTGGAGTTCCCCCCAGTCCTCCCTATCACCCCTTTGCTACCCACTCCGG
ATACTTCTCCAGTCTGTACCCTCATCACCATTTCGGCCCATTCCCACATCATCACTCCTACCCAGAGCAG
GAGACTGTAAGTCTCTTCATCCCAACCCAGGCTGTGGGTGCTATCATCGGGAAGAAGGGGGCACACATCA
AACAGCTCGCTCGATTTGCTGGTGCCTCCATCAAGATTGCTCCAGCAGAAGGTCCAGATGTCAGTGAGAG
GATGGTCATCATCACTGGTCCTCCTGAAGCCCAGTTTAAGGCTCAGGGACGGATCTTTGGGAAACTGAAG
GAAGAAAACTTCTTTAATCCCAAAGAAGAAGTGAAGCTGGAGGCCCACATCCGAGTCCCCTCGTCGACCG
CTGGCCGGGTGATTGGCAAGGGCGGGAAAACCGTGAACGAGCTGCAGAACTTGACAAGTGCAGAAGTTAT
CGTGCCTCGTGACCAAACGCCAGACGAGAATGAGGAAGTGATCGTCAGAATTATCGGGCATTTTTTTGCT
AGCCAGACTGCACAACGCAAGATCAGGGAAATTGTACAGCAGGTGAAGCAGCAGGAGCAGAGATACCCTC
AGGGAGTCGCCCCACAGCGCAGCAAGTGA

Translation (592 aa):
MMNKLYIGNLSPAVTADDLRQLFGDRKLPLAGQVLLKSGYAFVDYPDQNWAIRAIETLSGKVELHGKIME
VDYSVSKKLRSRRIQIRNIPPHLQWEVLDGLLAEYGTVENVEQVNTDTETAVVNVTYMTREEAKLAIEKL
SGHQFEDYSFKISYIPDEEVSSPSPPHRAREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIK
NITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEACRMILEIMQKEADETKLAEEVPLKILAHNGFVG
RLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVRGTIEACANAEIEIMKKLREAFENDMLAVN
QQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSGYFSSLYPHHHFGPFPHHHSYPEQ
ETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKLK
EENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENEEVIVRIIGHFFA
SQTAQRKIREIVQQVKQQEQRYPQGVAPQRSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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