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Report for CCDS50738.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50738.1 Public Mus musculus 2 Zfp937 23 108 98 CCDS HistoryNCBI Gene:245174Re-query CCDS DB by CCDS ID:50738.1Re-query CCDS DB by GeneID:245174See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50738.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000073782.3 ENSMUSP00000073454.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000073782.3Link to Ensembl Protein Viewer:ENSMUSP00000073454.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000073782Re-query CCDS DB by Protein ID:ENSMUSP00000073454
Original member Current member NCBI NM_001142411.2 NP_001135883.1 Accepted alive Link to Nucleotide Sequence:NM_001142411.2Link to Protein Sequence:NP_001135883.1Re-query CCDS DB by Nucleotide ID:NM_001142411Re-query CCDS DB by Protein ID:NP_001135883Link to BLAST:NP_001135883.1

Chromosomal Locations for CCDS 50738.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 150218196 150218198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150236692 150236818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150237029 150237089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150238243 150239563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1512 nt):
ATGGGTGTTGTGACCTATGATGATGTGCATGTGAACTTCACTCAGGAAGAGTGGGCTTTGCTGGATCCTT
CTCAAAAGAATCTCTACAGAGATGTGATGCTGGAGACCTACAGGAATCTTGCTGCTATAGGCTACAGTTG
GGAAGACCATAATCCTGAAGAACATTTTCAAAGTTCTAGAAGACATGGAAGGCTTGAAAAAAGTCATATT
GAAGAGAAGCCCTCTGAATTTACTCAATGTGGTAAAGTCATTGCATATCAGAGCCATCCTCAAGGGCATC
AACAAATTCATACTGGAGAGAAACCCTATGAATGTGAGCAATGTGGTAAATCCTTTGTATGTCAGAGTGG
TCTCCAACAGCATAAAAGAACACATCATGGAGAGAAATCCTATGAATGTAACCAGTGTGATAAGGCCTTT
GCTCTTCTCTGTCATCTTCGAGGGCATCAAAGAATTCATACTGGAGAGAAACCCTATGAATGTAATCAAT
GTGATAAAGCCTTTGCATGTCAAACTAGTCTCCTGTATCATAAAAGAACACATTCTGGAGAGAAACTCTA
TGTCTGTAATGAATGTGGCAAAGCCTTTGTACTTCAAAGTTATCTTCAGATACATAAAAGAACACATACT
GGAGAGAAACCCTTTGGATGTGACCAGTGTGATAAGGCATTTGCACAAAACAGTCATCTCCTAACACATA
AAAGAACACATACTGGAGAGAAACCCTTTGGATGTGACCAGTGTGATAAGGCATTTGCACAAAACAGTCA
TCTCCTAACACATAAAAGAACTCATACTGGAGAGAAACCCTTTGGATGTGACCAGTGTGATAAGGCATTT
GCACAAAACAGTCATCTCCTAACACATAAAAGAACTCATACTGGAGAGAAACCCTATGAATGTAAGCAGT
GTGGTAAAGCCTTTGGGTTTCAAAGTGGTCTGCAAAAGCATAAACGAACACATACTGGAGAGAAACCCTA
TGAATGTAAGCAGTGTGGTAAAGCCTTTGGGTATCAAAGTGGTCTGCAAAAGCATAAACGAACACATACT
GGAGAGAAACCCTATGAATGTAATCAGTGTGATAAGGCATTTGCATGTCAAGCTAGTCTCCTGAATCATA
AACGATCACACACTGGTGAGAAGCCATATGAATGTAGTGAATGTGGTAAAGCCTTTGTACTTCACAGTTA
TCTTCAAATACATAAAAGGACACATACTGGAGAGAAACCCTTTGAATGTGACCAATGTGATAAAGCCTTT
GCTCGAAACACTCTTCTCCTAAAACATAAAAGAATACATACTGGACAGAAAGCCTATGGATGCAAGCAAT
GTGGCAAAGCCTTTGCAAATCACAGTAATCTCCAAGTGCATAAAAGAACACATACTGGAGAGAAGCCCTA
CGAATGTAAGCAGTGTGGTAAAGCCTTTGGGTGTCAAAGTGGTCTGCAATATCATAAAAGAACACAACAC
ATACAGGAGAGAAACCCTATGACTGTAATCAATGTGATCTAG

Translation (503 aa):
MGVVTYDDVHVNFTQEEWALLDPSQKNLYRDVMLETYRNLAAIGYSWEDHNPEEHFQSSRRHGRLEKSHI
EEKPSEFTQCGKVIAYQSHPQGHQQIHTGEKPYECEQCGKSFVCQSGLQQHKRTHHGEKSYECNQCDKAF
ALLCHLRGHQRIHTGEKPYECNQCDKAFACQTSLLYHKRTHSGEKLYVCNECGKAFVLQSYLQIHKRTHT
GEKPFGCDQCDKAFAQNSHLLTHKRTHTGEKPFGCDQCDKAFAQNSHLLTHKRTHTGEKPFGCDQCDKAF
AQNSHLLTHKRTHTGEKPYECKQCGKAFGFQSGLQKHKRTHTGEKPYECKQCGKAFGYQSGLQKHKRTHT
GEKPYECNQCDKAFACQASLLNHKRSHTGEKPYECSECGKAFVLHSYLQIHKRTHTGEKPFECDQCDKAF
ARNTLLLKHKRIHTGQKAYGCKQCGKAFANHSNLQVHKRTHTGEKPYECKQCGKAFGCQSGLQYHKRTQH
IQERNPMTVINVI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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