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Report for CCDS50804.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50804.1 Public Mus musculus 2 Zfp64 23 108 98 CCDS HistoryNCBI Gene:22722Re-query CCDS DB by CCDS ID:50804.1Re-query CCDS DB by GeneID:22722See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50804.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000087971.10 ENSMUSP00000085285.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000087971.10Link to Ensembl Protein Viewer:ENSMUSP00000085285.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000087971Re-query CCDS DB by Protein ID:ENSMUSP00000085285
Original member Current member NCBI NM_009564.2 NP_033590.2 Accepted alive Link to Nucleotide Sequence:NM_009564.2Link to Protein Sequence:NP_033590.2Re-query CCDS DB by Nucleotide ID:NM_009564Re-query CCDS DB by Protein ID:NP_033590Link to BLAST:NP_033590.2

Chromosomal Locations for CCDS 50804.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 168925660 168926933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168935211 168935462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168939971 168940033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168940737 168940898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168951545 168951778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168955119 168955164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2031 nt):
ATGAACGCGAGCGTGGAAGGAGACACCTTTTCTGGATCGATGCAAATCCCAGGAGGCACCACGGTGCTGG
TGGAGCTGGCACCGGACATCCACATCTGCGGCCTCTGTAAGCAGCACTTCAGCAATCTGGATGCCTTTGT
GGCCCACAAACAGAGCGGCTGCCAGCTGACTACCACGCCGGTGACAGCCCCCAGCACGGTCCAGTTTGTG
GCAGAGGAGACAGAGCCTGCCACCCAGACCACCACAACGACCATCAGTTCAGAGACTCAGACTATCACAG
TTTCAGCTCCAGAGTTCGTCTTTGAACATGGCTACCAAACTTACCTGCCCACGGAGAGCACTGACAACCA
GACAGCCACCGTGATCTCTCTCCCCACCAAGTCACGCACCAAAAAGCCCACAGCACCCCCTGCTCAGAAG
AGACTCGGCTGCTGCTATCCAGGTTGCCAGTTCAAGACCGCCTATGGCATGAAGGACATGGAGCGACACC
TGAAGATCCACACCGGTGACAAACCCCACAAGTGTGAGGTGTGCGGGAAGTGCTTCAGCCGGAAGGACAA
GCTGAAGACGCACATGCGCTGCCACACGGGCGTCAAGCCCTACAAGTGCAAGACGTGCGACTACGCGGCG
GCGGACAGCAGCAGCCTTAACAAGCACCTGCGCATCCACTCGGACGAGCGACCCTTCAAGTGCCAGATCT
GTCCCTACGCCAGTCGCAACTCCAGCCAGCTCACCGTGCACCTGCGCTCGCACACGGGGGACGCCCCCTT
CCAGTGCTGGCTCTGTAGTGCCAAGTTCAAAATCAGCTCGGACTTGAAAAGGCACATGCGTGTGCACTCG
GGGGAGAAGCCTTTCAAGTGCGAATTCTGCAATGTCCGCTGTACCATGAAGGGGAACCTCAAATCGCACA
TCCGCATCAAGCACAGTGGGAATAACTTCAAGTGTCCGCACTGCGACTTCCTGGGTGACAGCAAATCCAC
CCTGCGGAAGCACAGTCGCCTGCACCAGTCGGAGCACCCGGAGAAGTGTCCCGAGTGCAGCTACTCCTGT
TCCAGCAAGGCTGCGCTGCGCGTGCACGAGCGCATCCACTGCACCGAGCGCCCGTTCAAGTGCAGCTACT
GCAGCTTCGATACCAAGCAACCCAGCAACCTGAGCAAGCACATGAAGAAGTTCCACGCCGACATGCTCAA
GAACGAGGCTCCGGAGAAGAAGGAGAGCGGCAGGCAGAGCAGCCGGCAGGTGGCCAGGCTGGATGCCAAG
AAGACGTTCCACTGCGACATCTGTGACGCCTCGTTTATGCGGGAGGACTCGCTCCGCAGCCACAAACGGC
AGCACAGTGAGTACCACAGTAAGAACTCGGACGTGACTGTAGTACAGCTTCACCTTGAACCCAGCAAGCA
GCCGGCTGCGCCCCTCACCGTAGAGCAAATCCAGGTCCCCCTCCAGTCCAGCCAGGTGCCCCAGTTCAGC
GAGGGGAGGGTCAAGATCATCGTGGGGCATCAGGTGCCTCAGACGAACGCCATAGTCCAAGCGGCCGCAG
CTGCCGTCAACATTGTGCCCCCCACCCTGGTAGCCCAGACCCCAGAGGAGATCCCAGGGAACGGCCGGCT
ACAGATCCTTCGCCAGGTCAGTCTCATTGCCCCTCCTCAGTCCTCCGGGTGTCCCGGCGAAGCAGGTGCC
CTGAGTCAGCCAACTGTCCTGCTGACCACCCATGATCAGACGGCAGGGGCCGCCCTGCAGCAGGCTCTGA
TCCCCACCACCCCGGTTGGGACCCAGGAAGGCACGGGAAACCAGACATTCATTGCCAGTTCGGGCATCAC
GTGCTCGGACTTGGAAGGCCTTAACGCTCTGATTCAGGAGGGAACGACGGAAGTGACTGTGGTGAGCGAT
GGGGACCAGAGCATCGCAGTGGCCACCACGGCACCCTCTATCTTCTCTACCCAGCAGGAACTGCCCAAGC
AGACTTACTCCATCATCCACGGGGCGGCACACCCCGCCCTGCTCTGTCCCGCTGACTCCATTCCTGATTA
G

Translation (676 aa):
MNASVEGDTFSGSMQIPGGTTVLVELAPDIHICGLCKQHFSNLDAFVAHKQSGCQLTTTPVTAPSTVQFV
AEETEPATQTTTTTISSETQTITVSAPEFVFEHGYQTYLPTESTDNQTATVISLPTKSRTKKPTAPPAQK
RLGCCYPGCQFKTAYGMKDMERHLKIHTGDKPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAA
ADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDAPFQCWLCSAKFKISSDLKRHMRVHS
GEKPFKCEFCNVRCTMKGNLKSHIRIKHSGNNFKCPHCDFLGDSKSTLRKHSRLHQSEHPEKCPECSYSC
SSKAALRVHERIHCTERPFKCSYCSFDTKQPSNLSKHMKKFHADMLKNEAPEKKESGRQSSRQVARLDAK
KTFHCDICDASFMREDSLRSHKRQHSEYHSKNSDVTVVQLHLEPSKQPAAPLTVEQIQVPLQSSQVPQFS
EGRVKIIVGHQVPQTNAIVQAAAAAVNIVPPTLVAQTPEEIPGNGRLQILRQVSLIAPPQSSGCPGEAGA
LSQPTVLLTTHDQTAGAALQQALIPTTPVGTQEGTGNQTFIASSGITCSDLEGLNALIQEGTTEVTVVSD
GDQSIAVATTAPSIFSTQQELPKQTYSIIHGAAHPALLCPADSIPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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