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Report for CCDS51661.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51661.1 Public Mus musculus 5 Fzd9 23 108 98 CCDS HistoryNCBI Gene:14371Re-query CCDS DB by CCDS ID:51661.1Re-query CCDS DB by GeneID:14371See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51661.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062572.2 ENSMUSP00000053551.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062572.2Link to Ensembl Protein Viewer:ENSMUSP00000053551.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000062572Re-query CCDS DB by Protein ID:ENSMUSP00000053551
Original member Current member NCBI NM_010246.1 NP_034376.1 Accepted alive Link to Nucleotide Sequence:NM_010246.1Link to Protein Sequence:NP_034376.1Re-query CCDS DB by Nucleotide ID:NM_010246Re-query CCDS DB by Protein ID:NP_034376Link to BLAST:NP_034376.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034376.1 592 Q9R216 592 100% 0 0

Chromosomal Locations for CCDS 51661.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 135249251 135251029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1779 nt):
ATGGCCGTGCCACCGCTGCTCCGCGGGGCGCTGCTGCTGTGGCAGCTGCTGGCGACGGGCGGCGCGGCGC
TGGAGATCGGCCGCTTCGATCCGGAGCGTGGCCGTGGCCCCGCACCGTGCCAAGCGATGGAGATCCCCAT
GTGCCGGGGCATTGGCTACAACCTGACCCGCATGCCCAACCTACTGGGCCACACGTCGCAGGGCGAGGCG
GCGGCGCAGCTGGCCGAGTTCTCGCCCCTCGTGCAGTACGGCTGCCACAGCCACCTGCGCTTCTTCCTCT
GCTCGCTCTACGCCCCAATGTGCACCGACCAGGTCTCCACTCCCATCCCAGCCTGCCGGCCCATGTGCGA
GCAGGCTCGCCTGCGCTGCGCCCCCATCATGGAGCAATTCAATTTCGGCTGGCCCGACTCACTCGACTGT
GCCCGGCTCCCCACGCGCAACGACCCGCACGCACTCTGTATGGAGGCACCCGAGAACGCTACAGCAGGCC
CCACAGAACCCCACAAGGGCCTGGGCATGCTCCCTGTGGCACCTCGGCCCGCGAGGCCACCGGGAGATTC
AGCCCCAGGTCCCGGCAGCGGTGGCACCTGCGACAACCCCGAGAAGTTCCAGTACGTGGAGAAGAGTCGC
TCGTGCGCTCCGCGCTGCGGGCCAGGCGTCGAGGTGTTCTGGTCTCGGCGCGATAAGGACTTCGCGCTGG
TTTGGATGGCTGTGTGGTCCGCGTTGTGTTTCTTCTCCACGGCCTTCACCGTGTTCACCTTCCTGCTGGA
GCCTCACCGGTTCCAGTACCCAGAGCGCCCGATTATCTTCCTTTCTATGTGCTACAATGTCTACTCCTTG
GCCTTCCTGATCAGAGCGGTGGCAGGTGCACAGAGTGTGGCATGCGACCAGGAGGCAGGGGCTCTGTATG
TGATCCAGGAGGGTCTGGAAAACACAGGCTGCACCCTGGTCTTCCTGTTGCTCTATTATTTCGGGATGGC
CAGCTCACTTTGGTGGGTGGTTTTGACTCTAACCTGGTTCCTGGCTGCAGGCAAAAAATGGGGCCACGAG
GCCATCGAGGCTCACGGCAGCTACTTCCACATGGCAGCGTGGGGCCTGCCAGCACTCAAAACTATCGTGG
TCCTGACTCTGCGCAAGGTGGCTGGCGATGAACTGACTGGGCTCTGCTATGTAGCCAGCATGGACCCGGC
AGCCCTCACTGGCTTTGTGTTGGTACCCCTATCTTGCTACCTGGTACTGGGTACCAGTTTCCTCCTGACC
GGTTTTGTGGCTCTCTTCCATATCCGCAAAATCATGAAGACGGGAGGCACCAATACGGAGAAGCTGGAGA
AGCTGATGGTCAAAATCGGAGTCTTTTCCATCCTTTACACAGTGCCGGCCACCTGCGTCATTGTCTGCTA
CGTTTATGAACGCCTCAACATGGACTTCTGGCGGCTTCGGGCCACAGAGCAACCATGTACTGCTGCCACC
GTGCCTGGAGGCCGGAGAGACTGCTCGCTGCCAGGGGGCTCGGTGCCCACTGTGGCTGTCTTCATGCTCA
AAATCTTCATGTCCTTGGTGGTGGGCATCACCAGTGGAGTCTGGGTATGGAGTTCCAAGACTTTTCAGAC
TTGGCAGAGCCTGTGCTACCGAAAAATGGCAGCTGGCCGAGCCCGGGCCAAGGCCTGCCGAACCCCAGGG
GGCTATGGCCGGGGTACCCACTGCCACTACAAAGCCCCCACGGTGGTCTTGCACATGACTAAGACAGACC
CCTCTCTGGAGAACCCCACACACCTCTAG

Translation (592 aa):
MAVPPLLRGALLLWQLLATGGAALEIGRFDPERGRGPAPCQAMEIPMCRGIGYNLTRMPNLLGHTSQGEA
AAQLAEFSPLVQYGCHSHLRFFLCSLYAPMCTDQVSTPIPACRPMCEQARLRCAPIMEQFNFGWPDSLDC
ARLPTRNDPHALCMEAPENATAGPTEPHKGLGMLPVAPRPARPPGDSAPGPGSGGTCDNPEKFQYVEKSR
SCAPRCGPGVEVFWSRRDKDFALVWMAVWSALCFFSTAFTVFTFLLEPHRFQYPERPIIFLSMCYNVYSL
AFLIRAVAGAQSVACDQEAGALYVIQEGLENTGCTLVFLLLYYFGMASSLWWVVLTLTWFLAAGKKWGHE
AIEAHGSYFHMAAWGLPALKTIVVLTLRKVAGDELTGLCYVASMDPAALTGFVLVPLSCYLVLGTSFLLT
GFVALFHIRKIMKTGGTNTEKLEKLMVKIGVFSILYTVPATCVIVCYVYERLNMDFWRLRATEQPCTAAT
VPGGRRDCSLPGGSVPTVAVFMLKIFMSLVVGITSGVWVWSSKTFQTWQSLCYRKMAAGRARAKACRTPG
GYGRGTHCHYKAPTVVLHMTKTDPSLENPTHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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