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Report for CCDS51964.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
51964.1 |
Public |
Mus musculus |
7 |
Myadm |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:50918](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:51964.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:50918](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 7 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 51964.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000096744.7 |
ENSMUSP00000094505.5 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000096744.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000094505.5](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000096744](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000094505](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000164553.6 |
ENSMUSP00000131318.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000164553.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000131318.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000164553](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000131318](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000203328.2 |
ENSMUSP00000144984.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000203328.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000144984.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000203328](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000144984](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000203566.2 |
ENSMUSP00000145120.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000203566.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000145120.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000203566](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000145120](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001093764.1 |
NP_001087233.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001093764.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001087233.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001093764](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001087233](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001087233.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001093765.1 |
NP_001087234.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001093765.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001087234.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001093765](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001087234](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001087234.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001093766.1 |
NP_001087235.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001093766.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001087235.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001093766](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001087235](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001087235.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_016969.2 |
NP_058665.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_016969.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_058665.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_016969](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_058665](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_058665.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 51964.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (963 nt): ATGCCGGTAACAGTAACTCGTACAACCATCACGACTACAACGTCATCCTCCACCACTGTGGGGTCCGCTC GGGCGCTGACCCAGCCGCTGGGCCTCCTCCGCCTCCTGCAGCTAATATCCACCTGTGTGGCTTTCTCGCT GGTGGCCAGTGTGGGTGCCTGGACAGGGCCCATGGGTAACTGGGCCATGTTCACCTGGTGTTTCTGCTTT GCTGTTACCCTCATCATCCTGATTGTGGAGTTAGGTGGACTCCAGGCCCACTTCCCCCTGTCATGGCGAA ACTTCCCCATCACCTTTGCCTGCTACGCGGCCCTCTTCTGCCTGTCGTCTTCCATCATCTATCCCACCAC CTATGTGCAGTTCCTAGCTCATGGACGTACCCGGGACCATGCCATCGCTGCCACCACTTTCTCCTGCGTT GCCTGTTTGGCGTATGCCACTGAAGTGGCCTGGACCCGTGCAAGGCCCGGTGAGATCACTGGCTATATGG CTACCGTGCCAGGGCTGCTCAAAGTTTTTGAGACCTTCGTAGCCTGTATCATCTTTGCCTTCATCAGTGA GCCGCTCCTGTATAATCAGAAGCCAGCCCTGGAGTGGTGTGTGGCAGTCTATGCCATCTGCTTCATACTA GCAGGGGTGACCATCCTGCTCAACCTGGGGGATTGTACCAACGTGTTGCCCATCCCTTTCCCCACCTTCC TCTCAGGCTTGGCCTTACTCTCTGTTCTCTTTTACGCCACTGCCATCGTCCTCTGGCCCCTCTACCAATT TGATCAGAGATATCAGGGCCAACCCCGCCGTTCAATGGATCCAAGCTGCACTCGTAGTATTAGTTATATA CAACCCAACACGGTGTGTTTCTGGGACCGACGACTGGCGGTGTCCATCCTGACAGGTATCAACCTGCTGG CATATGTGTCTGATCTGGTGTACTCCACTCGTCTGGTGTTCGTCAAGGTCTGA
Translation (320 aa): MPVTVTRTTITTTTSSSTTVGSARALTQPLGLLRLLQLISTCVAFSLVASVGAWTGPMGNWAMFTWCFCF AVTLIILIVELGGLQAHFPLSWRNFPITFACYAALFCLSSSIIYPTTYVQFLAHGRTRDHAIAATTFSCV ACLAYATEVAWTRARPGEITGYMATVPGLLKVFETFVACIIFAFISEPLLYNQKPALEWCVAVYAICFIL AGVTILLNLGDCTNVLPIPFPTFLSGLALLSVLFYATAIVLWPLYQFDQRYQGQPRRSMDPSCTRSISYI QPNTVCFWDRRLAVSILTGINLLAYVSDLVYSTRLVFVKV
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