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Report for CCDS52047.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52047.1 Public Mus musculus 7 Ceacam12 23 108 98 CCDS HistoryNCBI Gene:67315Re-query CCDS DB by CCDS ID:52047.1Re-query CCDS DB by GeneID:67315See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52047.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000108487.8 ENSMUSP00000104127.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108487.8Link to Ensembl Protein Viewer:ENSMUSP00000104127.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000108487Re-query CCDS DB by Protein ID:ENSMUSP00000104127
Original member Current member NCBI NM_001162523.1 NP_001155995.1 Accepted alive Link to Nucleotide Sequence:NM_001162523.1Link to Protein Sequence:NP_001155995.1Re-query CCDS DB by Nucleotide ID:NM_001162523Re-query CCDS DB by Protein ID:NP_001155995Link to BLAST:NP_001155995.1

Chromosomal Locations for CCDS 52047.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 18066061 18066124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 18067162 18067521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 18069095 18069451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 18077395 18077465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (852 nt):
ATGATGAACTCTGATGCACTTTCCTGTAAAGACTGTACATCCTGGCAGGAGCTCCTGCTCACAGTCTCCA
TTTTAACATGCTGGCTGCTTCCCACTACTGCCCAGATAACTATTGAATCAGTGCCTCCCATTGCTGTTGA
AGGGGATAATGTTCTTCTGTTTGTGCAAAACTTGCCAGAGAATGTTCAAACCCTTTCCTGGTACAAAGGA
GGTAAACTGCTCAAGATGTTTGAAATTGCAAGACACGTGATAGCTACCAATTCTAGTGTGATGGGACCTG
CACACAGTGGTAGAGAGACGATGCTCAATAATGGATCTCTGATGATCAAGAATGTCACCAGAAAAGACTC
GGGATACTACACTCTACAAATACTTGATACAACCTCAAGACGTGAAATAATGCGTGCAGAATTCTTTGTA
CAGAGACCAATTTTAGGCTTCAGAAAGCATCCTACTTCTCAACTTAAAATTGAGTTTGTGCCACCTAGGA
TTGAAGAAAATGATGATGTTCTTCTGCTGGTTTATAATCTGCCGGAGAATCTTCAAGGCTTTGTCTGGCA
CAAAGGGGTATTTCCAGTTGACCATTTTAAGATAGCAAGCCATTCATTCCTCACCAATTCAACCATGCTG
GGGCGCACATATTTAGACAGACTGACCGTATGCAGTGATGGATCCCTGCTGCTCTCGAAGGTCTCACAGG
AAGACACAGGACTTTACAGCCTACGAACCATACCTGTGGATTTGATGTCAGAATCTGCCATTGTGTACCT
CAAAGTAAACAACTGTCTCGCTTTGGGTTGGACCTTGGCATCGTGTGGAAGTGAAGCTGCTATCAGGTGC
TTCTGTACATGA

Translation (283 aa):
MMNSDALSCKDCTSWQELLLTVSILTCWLLPTTAQITIESVPPIAVEGDNVLLFVQNLPENVQTLSWYKG
GKLLKMFEIARHVIATNSSVMGPAHSGRETMLNNGSLMIKNVTRKDSGYYTLQILDTTSRREIMRAEFFV
QRPILGFRKHPTSQLKIEFVPPRIEENDDVLLLVYNLPENLQGFVWHKGVFPVDHFKIASHSFLTNSTML
GRTYLDRLTVCSDGSLLLSKVSQEDTGLYSLRTIPVDLMSESAIVYLKVNNCLALGWTLASCGSEAAIRC
FCT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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