NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS52243.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
52243.1 Public Mus musculus 7 Fcgrt 23 108 98 CCDS HistoryNCBI Gene:14132Re-query CCDS DB by CCDS ID:52243.1Re-query CCDS DB by GeneID:14132See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 52243.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000003512.8 ENSMUSP00000003512.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000003512.8Link to Ensembl Protein Viewer:ENSMUSP00000003512.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000003512Re-query CCDS DB by Protein ID:ENSMUSP00000003512
Original member Current member NCBI NM_010189.3 NP_034319.2 Accepted alive Link to Nucleotide Sequence:NM_010189.3Link to Protein Sequence:NP_034319.2Re-query CCDS DB by Nucleotide ID:NM_010189Re-query CCDS DB by Protein ID:NP_034319Link to BLAST:NP_034319.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034319.2 365 Q61559 365 100% 0 0

Chromosomal Locations for CCDS 52243.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 45093246 45093355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45093782 45093898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45095160 45095429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45101910 45102185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45102414 45102671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45103003 45103069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1098 nt):
ATGGGGATGCCACTGCCCTGGGCCCTCAGCCTCTTGTTGGTCCTCCTGCCTCAGACCTGGGGCTCAGAGA
CCCGCCCCCCACTGATGTATCATCTCACGGCTGTGTCAAACCCATCTACGGGGCTTCCCTCTTTCTGGGC
TACAGGCTGGTTGGGTCCTCAGCAGTATCTGACCTACAACAGCCTGCGGCAGGAAGCTGACCCCTGTGGG
GCCTGGATGTGGGAAAATCAGGTGTCTTGGTATTGGGAGAAGGAGACCACAGACCTCAAAAGCAAAGAAC
AGCTCTTCTTGGAGGCCCTCAAGACCCTGGAGAAGATATTAAATGGGACCTACACACTGCAGGGCCTGCT
GGGCTGTGAACTGGCCTCGGATAATTCCTCAGTGCCCACGGCTGTGTTTGCCCTCAATGGTGAGGAGTTT
ATGAAATTCAACCCAAGAATCGGCAATTGGACTGGGGAGTGGCCTGAGACGGAAATCGTTGCTAATCTGT
GGATGAAGCAGCCTGATGCGGCCAGGAAGGAGAGCGAGTTCCTGCTAAACTCTTGTCCGGAGCGACTGCT
AGGCCACCTGGAGAGGGGCCGACGGAACCTGGAGTGGAAGGAGCCGCCGTCTATGCGCCTGAAGGCCCGT
CCTGGCAACTCTGGCTCCTCCGTGCTGACCTGTGCTGCTTTCTCCTTCTACCCACCGGAGCTCAAGTTCC
GATTCCTGCGCAATGGGCTAGCCTCAGGCTCCGGGAATTGCAGCACTGGTCCCAATGGAGATGGCTCTTT
CCACGCATGGTCATTGCTGGAGGTCAAACGTGGAGATGAGCACCATTATCAATGTCAAGTGGAGCATGAG
GGGCTGGCACAGCCTCTCACTGTGGACCTAGATTCATCAGCCAGATCTTCTGTGCCTGTGGTTGGAATCG
TTCTTGGTTTATTGCTGGTGGTAGTGGCCATCGCAGGCGGTGTGCTGTTGTGGGGCAGGATGCGCAGCGG
TCTGCCAGCCCCATGGCTTTCTCTCAGCGGCGATGACTCTGGTGACCTGTTGCCTGGTGGGAACTTGCCC
CCAGAAGCTGAACCTCAAGGTGCAAATGCCTTTCCAGCCACTTCCTGA

Translation (365 aa):
MGMPLPWALSLLLVLLPQTWGSETRPPLMYHLTAVSNPSTGLPSFWATGWLGPQQYLTYNSLRQEADPCG
AWMWENQVSWYWEKETTDLKSKEQLFLEALKTLEKILNGTYTLQGLLGCELASDNSSVPTAVFALNGEEF
MKFNPRIGNWTGEWPETEIVANLWMKQPDAARKESEFLLNSCPERLLGHLERGRRNLEWKEPPSMRLKAR
PGNSGSSVLTCAAFSFYPPELKFRFLRNGLASGSGNCSTGPNGDGSFHAWSLLEVKRGDEHHYQCQVEHE
GLAQPLTVDLDSSARSSVPVVGIVLGLLLVVVAIAGGVLLWGRMRSGLPAPWLSLSGDDSGDLLPGGNLP
PEAEPQGANAFPATS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH