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Report for CCDS5230.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5230.1 Public Homo sapiens 6 AKAP12 24 110 108 CCDS HistoryNCBI Gene:9590Re-query CCDS DB by CCDS ID:5230.1Re-query CCDS DB by GeneID:9590See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5230.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354675.10 ENSP00000346702.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354675.10Link to Ensembl Protein Viewer:ENSP00000346702.6Re-query CCDS DB by Nucleotide ID:ENST00000354675Re-query CCDS DB by Protein ID:ENSP00000346702
Original member Current member NCBI NM_144497.2 NP_653080.1 Accepted alive Link to Nucleotide Sequence:NM_144497.2Link to Protein Sequence:NP_653080.1Re-query CCDS DB by Nucleotide ID:NM_144497Re-query CCDS DB by Protein ID:NP_653080Link to BLAST:NP_653080.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653080.1 1684 Q02952-2 1684 100% 0 0

Chromosomal Locations for CCDS 5230.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 151325861 151325885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 151348711 151353740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5055 nt):
ATGCTGGGGACCATCACCATCACAGTTGGACAGAGAGACTCTGAAGATGTGAGCAAAAGAGACTCCGATA
AAGAGATGGCTACTAAGTCAGCGGTTGTTCACGACATCACAGATGATGGGCAGGAGGAGACACCCGAAAT
AATCGAACAGATTCCTTCTTCAGAAAGCAATTTAGAAGAGCTAACACAACCCACTGAGTCCCAGGCTAAT
GATATTGGATTTAAGAAGGTGTTTAAGTTTGTTGGCTTTAAATTCACTGTGAAAAAGGATAAGACAGAGA
AGCCTGACACTGTCCAGCTACTCACTGTGAAGAAAGATGAAGGGGAGGGAGCAGCAGGGGCTGGCGACCA
CAAGGACCCCAGCCTTGGGGCTGGAGAAGCAGCATCCAAAGAAAGCGAACCCAAACAATCTACAGAGAAA
CCCGAAGAGACCCTGAAGCGTGAGCAAAGCCACGCAGAAATTTCTCCCCCAGCCGAATCTGGCCAAGCAG
TGGAGGAATGCAAAGAGGAAGGAGAAGAGAAACAAGAAAAAGAACCTAGCAAGTCTGCAGAATCTCCGAC
TAGTCCCGTGACCAGTGAAACAGGATCAACCTTCAAAAAATTCTTCACTCAAGGTTGGGCCGGCTGGCGC
AAAAAGACCAGTTTCAGGAAGCCGAAGGAGGATGAAGTGGAAGCTTCAGAGAAGAAAAAGGAACAAGAGC
CAGAAAAAGTAGACACAGAAGAAGACGGAAAGGCAGAGGTTGCCTCCGAGAAACTGACCGCCTCCGAGCA
AGCCCACCCACAGGAGCCGGCAGAAAGTGCCCACGAGCCCCGGTTATCAGCTGAATATGAGAAAGTTGAG
CTGCCCTCAGAGGAGCAAGTCAGTGGCTCGCAGGGACCTTCTGAAGAGAAACCTGCTCCGTTGGCGACAG
AAGTGTTTGATGAGAAAATAGAAGTCCACCAAGAAGAGGTTGTGGCCGAAGTCCACGTCAGCACCGTGGA
GGAGAGAACCGAAGAGCAGAAAACGGAGGTGGAAGAAACAGCAGGGTCTGTGCCAGCTGAAGAATTGGTT
GAAATGGATGCAGAACCTCAGGAAGCTGAACCTGCCAAGGAGCTGGTGAAGCTCAAAGAAACGTGTGTTT
CCGGAGAGGACCCTACACAGGGAGCTGACCTCAGTCCTGATGAGAAGGTGCTGTCCAAACCCCCCGAAGG
CGTTGTGAGTGAGGTGGAAATGCTGTCATCACAGGAGAGAATGAAGGTGCAGGGAAGTCCACTAAAGAAG
CTTTTTACCAGCACTGGCTTAAAAAAGCTTTCTGGAAAGAAACAGAAAGGGAAAAGAGGAGGAGGAGACG
AGGAATCAGGGGAGCACACTCAGGTTCCAGCCGATTCTCCGGACAGCCAGGAGGAGCAAAAGGGCGAGAG
CTCTGCCTCATCCCCTGAGGAGCCCGAGGAGATCACGTGTCTGGAAAAGGGCTTAGCCGAGGTGCAGCAG
GATGGGGAAGCTGAAGAAGGAGCTACTTCCGATGGAGAGAAAAAAAGAGAAGGTGTCACTCCCTGGGCAT
CATTCAAAAAGATGGTGACGCCCAAGAAGCGTGTTAGACGGCCTTCGGAAAGTGATAAAGAAGATGAGCT
GGACAAGGTCAAGAGCGCTACCTTGTCTTCCACCGAGAGCACAGCCTCTGAAATGCAAGAAGAAATGAAA
GGGAGCGTGGAAGAGCCAAAGCCGGAAGAACCAAAGCGCAAGGTGGATACCTCAGTATCTTGGGAAGCTT
TAATTTGTGTGGGATCATCCAAGAAAAGAGCAAGGAGAGGGTCCTCTTCTGATGAGGAAGGGGGACCAAA
AGCAATGGGAGGAGACCACCAGAAAGCTGATGAGGCCGGAAAAGACAAAGAGACGGGGACAGACGGGATC
CTTGCTGGTTCCCAAGAACATGATCCAGGGCAGGGAAGTTCCTCCCCGGAGCAAGCTGGAAGCCCTACCG
AAGGGGAGGGCGTTTCCACCTGGGAGTCATTTAAAAGGTTAGTCACGCCAAGAAAAAAATCAAAGTCCAA
GCTGGAAGAGAAAAGCGAAGACTCCATAGCTGGGTCTGGTGTAGAACATTCCACTCCAGACACTGAACCC
GGTAAAGAAGAATCCTGGGTCTCAATCAAGAAGTTTATTCCTGGACGAAGGAAGAAAAGGCCAGATGGGA
AACAAGAACAAGCCCCTGTTGAAGACGCAGGGCCAACAGGGGCCAACGAAGATGACTCTGATGTCCCGGC
CGTGGTCCCTCTGTCTGAGTATGATGCTGTAGAAAGGGAGAAAATGGAGGCACAGCAAGCCCAAAAAAGC
GCAGAGCAGCCCGAGCAGAAGGCAGCCACTGAGGTGTCCAAGGAGCTCAGCGAGAGTCAGGTTCATATGA
TGGCAGCAGCTGTCGCTGACGGGACGAGGGCAGCTACCATTATTGAAGAAAGGTCTCCTTCTTGGATATC
TGCTTCAGTGACAGAACCTCTTGAACAAGTAGAAGCTGAAGCCGCACTGTTAACTGAGGAGGTATTGGAA
AGAGAAGTAATTGCAGAAGAAGAACCCCCCACGGTTACTGAACCTCTGCCAGAGAACAGAGAGGCCCGGG
GCGACACGGTCGTTAGTGAGGCGGAATTGACCCCCGAAGCTGTGACAGCTGCAGAAACTGCAGGGCCATT
GGGTGCCGAAGAAGGAACCGAAGCATCTGCTGCTGAAGAGACCACAGAAATGGTGTCAGCAGTCTCCCAG
TTAACCGACTCCCCAGACACCACAGAGGAGGCCACTCCGGTGCAGGAGGTGGAAGGTGGCGTACCTGACA
TAGAAGAGCAAGAGAGGCGGACTCAAGAGGTCCTCCAGGCAGTGGCAGAAAAAGTGAAAGAGGAATCCCA
GCTGCCTGGCACCGGTGGGCCAGAAGATGTGCTTCAGCCTGTGCAGAGAGCAGAGGCAGAAAGACCAGAA
GAGCAGGCTGAAGCGTCGGGTCTGAAGAAAGAGACGGATGTAGTGTTGAAAGTAGATGCTCAGGAGGCAA
AAACTGAGCCTTTTACACAAGGGAAGGTGGTGGGGCAGACCACCCCAGAAAGCTTTGAAAAAGCTCCTCA
AGTCACAGAGAGCATAGAGTCCAGTGAGCTTGTAACCACTTGTCAAGCCGAAACCTTAGCTGGGGTAAAA
TCACAGGAGATGGTGATGGAACAGGCTATCCCCCCTGACTCGGTGGAAACCCCTACAGACAGTGAGACTG
ATGGAAGCACCCCCGTAGCCGACTTTGACGCACCAGGCACAACCCAGAAAGACGAGATTGTGGAAATCCA
TGAGGAGAATGAGGTCGCATCTGGTACCCAGTCAGGGGGCACAGAAGCAGAGGCAGTTCCTGCACAGAAA
GAGAGGCCTCCAGCACCTTCCAGTTTTGTGTTCCAGGAAGAAACTAAAGAACAATCAAAGATGGAAGACA
CTCTAGAGCATACAGATAAAGAGGTGTCAGTGGAAACTGTATCCATTCTGTCAAAGACTGAGGGGACTCA
AGAGGCTGACCAGTATGCTGATGAGAAAACCAAAGACGTACCATTTTTCGAAGGACTTGAGGGGTCTATA
GACACAGGCATAACAGTCAGTCGGGAAAAGGTCACTGAAGTTGCCCTTAAAGGTGAAGGGACAGAAGAAG
CTGAATGTAAAAAGGATGATGCTCTTGAACTGCAGAGTCACGCTAAGTCTCCTCCATCCCCCGTGGAGAG
AGAGATGGTAGTTCAAGTCGAAAGGGAGAAAACAGAAGCAGAGCCAACCCATGTGAATGAAGAGAAGCTT
GAGCACGAAACAGCTGTTACCGTATCTGAAGAGGTCAGTAAGCAGCTCCTCCAGACAGTGAATGTGCCCA
TCATAGATGGGGCAAAGGAAGTCAGCAGTTTGGAAGGAAGCCCTCCTCCCTGCCTAGGTCAAGAGGAGGC
AGTATGCACCAAAATTCAAGTTCAGAGCTCTGAGGCATCATTCACTCTAACAGCGGCTGCAGAGGAGGAA
AAGGTCTTAGGAGAAACTGCCAACATTTTAGAAACAGGTGAAACGTTGGAGCCTGCAGGTGCACATTTAG
TTCTGGAAGAGAAATCCTCTGAAAAAAATGAAGACTTTGCCGCTCATCCAGGGGAAGATGCTGTGCCCAC
AGGGCCCGACTGTCAGGCAAAATCGACACCAGTGATAGTATCTGCTACTACCAAGAAAGGCTTAAGTTCC
GACCTGGAAGGAGAGAAAACCACATCACTGAAGTGGAAGTCAGATGAAGTCGATGAGCAGGTTGCTTGCC
AGGAGGTCAAAGTGAGTGTAGCAATTGAGGATTTAGAGCCTGAAAATGGGATTTTGGAACTTGAGACCAA
AAGCAGTAAACTTGTCCAAAACATCATCCAGACAGCCGTTGACCAGTTTGTACGTACAGAAGAAACAGCC
ACCGAAATGTTGACGTCTGAGTTACAGACACAAGCTCACGTGATAAAAGCTGACAGCCAGGACGCTGGAC
AGGAAACGGAGAAAGAAGGAGAGGAACCTCAGGCCTCTGCACAGGATGAAACACCAATTACTTCAGCCAA
AGAGGAGTCAGAGTCAACCGCAGTGGGACAAGCACATTCTGATATTTCCAAAGACATGAGTGAAGCCTCA
GAAAAGACCATGACTGTTGAGGTAGAAGGTTCCACTGTAAATGATCAGCAGCTGGAAGAGGTCGTCCTCC
CATCTGAGGAAGAGGGAGGTGGAGCTGGAACAAAGTCTGTGCCAGAAGATGATGGTCATGCCTTGTTAGC
AGAAAGAATAGAGAAGTCACTAGTTGAACCGAAAGAAGATGAAAAAGGTGATGATGTTGATGACCCTGAA
AACCAGAACTCAGCCCTGGCTGATACTGATGCCTCAGGAGGCTTAACCAAAGAGTCCCCAGATACAAATG
GACCAAAACAAAAAGAGAAGGAGGATGCCCAGGAAGTAGAATTGCAGGAAGGAAAAGTGCACAGTGAATC
AGATAAAGCGATCACACCCCAAGCACAGGAGGAGTTACAGAAACAAGAGAGAGAATCTGCAAAGTCAGAA
CTTACAGAATCTTAA

Translation (1684 aa):
MLGTITITVGQRDSEDVSKRDSDKEMATKSAVVHDITDDGQEETPEIIEQIPSSESNLEELTQPTESQAN
DIGFKKVFKFVGFKFTVKKDKTEKPDTVQLLTVKKDEGEGAAGAGDHKDPSLGAGEAASKESEPKQSTEK
PEETLKREQSHAEISPPAESGQAVEECKEEGEEKQEKEPSKSAESPTSPVTSETGSTFKKFFTQGWAGWR
KKTSFRKPKEDEVEASEKKKEQEPEKVDTEEDGKAEVASEKLTASEQAHPQEPAESAHEPRLSAEYEKVE
LPSEEQVSGSQGPSEEKPAPLATEVFDEKIEVHQEEVVAEVHVSTVEERTEEQKTEVEETAGSVPAEELV
EMDAEPQEAEPAKELVKLKETCVSGEDPTQGADLSPDEKVLSKPPEGVVSEVEMLSSQERMKVQGSPLKK
LFTSTGLKKLSGKKQKGKRGGGDEESGEHTQVPADSPDSQEEQKGESSASSPEEPEEITCLEKGLAEVQQ
DGEAEEGATSDGEKKREGVTPWASFKKMVTPKKRVRRPSESDKEDELDKVKSATLSSTESTASEMQEEMK
GSVEEPKPEEPKRKVDTSVSWEALICVGSSKKRARRGSSSDEEGGPKAMGGDHQKADEAGKDKETGTDGI
LAGSQEHDPGQGSSSPEQAGSPTEGEGVSTWESFKRLVTPRKKSKSKLEEKSEDSIAGSGVEHSTPDTEP
GKEESWVSIKKFIPGRRKKRPDGKQEQAPVEDAGPTGANEDDSDVPAVVPLSEYDAVEREKMEAQQAQKS
AEQPEQKAATEVSKELSESQVHMMAAAVADGTRAATIIEERSPSWISASVTEPLEQVEAEAALLTEEVLE
REVIAEEEPPTVTEPLPENREARGDTVVSEAELTPEAVTAAETAGPLGAEEGTEASAAEETTEMVSAVSQ
LTDSPDTTEEATPVQEVEGGVPDIEEQERRTQEVLQAVAEKVKEESQLPGTGGPEDVLQPVQRAEAERPE
EQAEASGLKKETDVVLKVDAQEAKTEPFTQGKVVGQTTPESFEKAPQVTESIESSELVTTCQAETLAGVK
SQEMVMEQAIPPDSVETPTDSETDGSTPVADFDAPGTTQKDEIVEIHEENEVASGTQSGGTEAEAVPAQK
ERPPAPSSFVFQEETKEQSKMEDTLEHTDKEVSVETVSILSKTEGTQEADQYADEKTKDVPFFEGLEGSI
DTGITVSREKVTEVALKGEGTEEAECKKDDALELQSHAKSPPSPVEREMVVQVEREKTEAEPTHVNEEKL
EHETAVTVSEEVSKQLLQTVNVPIIDGAKEVSSLEGSPPPCLGQEEAVCTKIQVQSSEASFTLTAAAEEE
KVLGETANILETGETLEPAGAHLVLEEKSSEKNEDFAAHPGEDAVPTGPDCQAKSTPVIVSATTKKGLSS
DLEGEKTTSLKWKSDEVDEQVACQEVKVSVAIEDLEPENGILELETKSSKLVQNIIQTAVDQFVRTEETA
TEMLTSELQTQAHVIKADSQDAGQETEKEGEEPQASAQDETPITSAKEESESTAVGQAHSDISKDMSEAS
EKTMTVEVEGSTVNDQQLEEVVLPSEEEGGGAGTKSVPEDDGHALLAERIEKSLVEPKEDEKGDDVDDPE
NQNSALADTDASGGLTKESPDTNGPKQKEKEDAQEVELQEGKVHSESDKAITPQAQEELQKQERESAKSE
LTES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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