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Report for CCDS53012.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53012.1 Public Mus musculus X Ndufb11 23 108 98 CCDS HistoryNCBI Gene:104130Re-query CCDS DB by CCDS ID:53012.1Re-query CCDS DB by GeneID:104130See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53012.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000116621.1 ENSMUSP00000112320.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000116621.1Link to Ensembl Protein Viewer:ENSMUSP00000112320.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000116621Re-query CCDS DB by Protein ID:ENSMUSP00000112320
Original member Current member NCBI NM_001358624.1 NP_001345553.1 Accepted alive Link to Nucleotide Sequence:NM_001358624.1Link to Protein Sequence:NP_001345553.1Re-query CCDS DB by Nucleotide ID:NM_001358624Re-query CCDS DB by Protein ID:NP_001345553Link to BLAST:NP_001345553.1
Original member Current member NCBI NM_019435.5 NP_062308.2 Accepted alive Link to Nucleotide Sequence:NM_019435.5Link to Protein Sequence:NP_062308.2Re-query CCDS DB by Nucleotide ID:NM_019435Re-query CCDS DB by Protein ID:NP_062308Link to BLAST:NP_062308.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001345553.1 151 O09111 151 100% 0 0
NP_062308.2 151 O09111 151 100% 0 0

Chromosomal Locations for CCDS 53012.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 20615419 20615542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20615714 20615844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 20617060 20617260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (456 nt):
ATGGCGGCCCGACTGTTAAGCTTGTATGGTCGCTGCCTGTCAGCAGCGGGGGCGATGAGAGGGCTCCCGG
CTGCTCGCGTTCGCTGGGAGTCCTCCAGGGCTGTAATCGCCCCATCCGGTGTGGAGAAAAAGCGGCAACG
AGAACCGACCATGCAGTGGCAGGAGGACCCAGAACCCGAGGACGAAAACGTCTACGCGAAGAACCCTGAC
TTTCATGGTTATGATAGTGACCCTGTGGTGGACGTCTGGAATATGCGAGCTGTCTTCTTCTTTGGTTTTT
CCATCGTCCTGGTCTTTGGGACCACCTTCGTGGCTTATGTGCCTGATTACAGGATGCAAGAGTGGGCCCG
CCGGGAAGCTGAGAGACTTGTGAAATACCGAGAAGTCAATGGCCTTCCCATCATGGAATCCAACTACTTC
GATCCCAGCAAGATCCAGTTACCAGAAGATGACTGA

Translation (151 aa):
MAARLLSLYGRCLSAAGAMRGLPAARVRWESSRAVIAPSGVEKKRQREPTMQWQEDPEPEDENVYAKNPD
FHGYDSDPVVDVWNMRAVFFFGFSIVLVFGTTFVAYVPDYRMQEWARREAERLVKYREVNGLPIMESNYF
DPSKIQLPEDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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