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Report for CCDS53091.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53091.1 Public Mus musculus X Zfp185 23 108 98 CCDS HistoryNCBI Gene:22673Re-query CCDS DB by CCDS ID:53091.1Re-query CCDS DB by GeneID:22673See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53091.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114546.8 ENSMUSP00000110193.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114546.8Link to Ensembl Protein Viewer:ENSMUSP00000110193.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000114546Re-query CCDS DB by Protein ID:ENSMUSP00000110193
Original member Current member NCBI NM_001109043.1 NP_001102513.1 Accepted alive Link to Nucleotide Sequence:NM_001109043.1Link to Protein Sequence:NP_001102513.1Re-query CCDS DB by Nucleotide ID:NM_001109043Re-query CCDS DB by Protein ID:NP_001102513Link to BLAST:NP_001102513.1

Chromosomal Locations for CCDS 53091.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 72997079 72997112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72997282 72997405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72997738 72997803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72998536 72998574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72998669 72998746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 72999251 72999337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73000017 73000100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73000988 73001071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73001408 73001446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73002575 73002658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73003373 73003459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73012440 73012628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73015739 73015849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73016695 73016775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73018374 73018442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73020868 73020970 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 73028845 73028943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1458 nt):
ATGAGTATTTCTTCCTTAGGAAGTATTGGGAAAGGGAGAACTGTACCATCTGGTGAAGAGGAGCGCAATA
ATATCCTAAGACAGATGAAAGTACGGACTACACTAAAGGGTGACCAGAGCTGGATCACCAAGCATGATGA
CTCTGAGGATCATACCATAGAGCCACTCTCACGTCACAACCGAGCCACATCCTTCTCATCAGTCAGAGAC
GAATCAAATGCCAGGTCTCCAAACGCAAGGGCTCCAGCTGGTTACATAATCCGGGGAGTGTTCACCCGAA
CAATAGATAGCTCTTCTCACTCCCAGCATCGCCCCTCTAAGACCAACGGAGCTCCAAGAAGTGCTTCTGG
GCAGCTGGGAGCAGCTAATTCTGGTCATCCTCTTCAGTCGTCTGGCTATAAGATGACTACGGAAGATTAT
AAGAAACTAGCACCGTACAACATCAGGCGCAGCTCCATATCAGGGACTGAGGAAGAGGAGGTGCCATTCA
CCCCAGATGAGCAGAAACGGAGGTCCCAGGCTGCACTTGGTGTTCTGAGGAAGACAGCCCCCCGGGAGCA
CTCTTACGTCCTCTCAGCAGCTAAGAAGACCACTAGTCCGACCCAGGAGCTGCAGTCGCCATTCCTTGCA
AAAAGGGTTGATGTGGTAGATGAGGACGTCCTTCCTGAGAAAAACCAGGAACCACCTGCTCTGGCAAGAC
CTGATCCTGGCCGAAGCAGCTCGACAACCGAGAAGATTGCCCATCGGCAGATTACACCCCCCACAGCAGA
ACTCCACCTGGTGGCCCCAGACCTGGAAGCCCTGAGCACTCCAGATTCTTGTGAGGAGAACAATGCAGCC
CCCAAGATCATCAAGGAAATACCTGGCACCCTACAAGATGGACAAAGTGACCCAACTGTGGCTTCTCAGC
AACTTGCAGATCTCAGCATCCTAGAGCCACAGGGTAGCCCCAGTGGAGCCGAGCAGCAAATCAAAGCCGA
GGACTGTACTAACATGCTGATGAGCCCTTCAAGCTGCATGGTCACTGTTACCATCTCTGACACCTCTGAA
CAATCTCAATTGTGTGTTCCTGGTGTCTCAAGCAAGGTGGACTCCAGCTCAACTATCAAAGGGATTCTCT
TCGTGAAGGAGTACATGAATACCAGTGAAGTGTCTTCTGGGAAGCCAGTGTCTTCACACTGTGACAGTCC
CAGCAGCATTGAAGACTCATTGGATCTGGCAAAGAAAGCCCCACATGAAGGTACTCCTTCTGAGAGACCA
ACCGAAGGGGTCTGTACTTACTGTAGCCATGAGATCCAAGATTGTCCGAAGATTACCCTTGAACATCTTG
GCATCTGCTGCCATGAGTATTGTTTTAAGTGCGGGATTTGCAATAAACCGATGGGTGATCTCCTAGATCA
GATCTTCATTCACCGTGACACCATCCACTGTGGGAAATGCTATGAGAAGCTCTTCTAG

Translation (485 aa):
MSISSLGSIGKGRTVPSGEEERNNILRQMKVRTTLKGDQSWITKHDDSEDHTIEPLSRHNRATSFSSVRD
ESNARSPNARAPAGYIIRGVFTRTIDSSSHSQHRPSKTNGAPRSASGQLGAANSGHPLQSSGYKMTTEDY
KKLAPYNIRRSSISGTEEEEVPFTPDEQKRRSQAALGVLRKTAPREHSYVLSAAKKTTSPTQELQSPFLA
KRVDVVDEDVLPEKNQEPPALARPDPGRSSSTTEKIAHRQITPPTAELHLVAPDLEALSTPDSCEENNAA
PKIIKEIPGTLQDGQSDPTVASQQLADLSILEPQGSPSGAEQQIKAEDCTNMLMSPSSCMVTVTISDTSE
QSQLCVPGVSSKVDSSSTIKGILFVKEYMNTSEVSSGKPVSSHCDSPSSIEDSLDLAKKAPHEGTPSERP
TEGVCTYCSHEIQDCPKITLEHLGICCHEYCFKCGICNKPMGDLLDQIFIHRDTIHCGKCYEKLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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