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Report for CCDS5323.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5323.1 Public Homo sapiens 7 ZFAND2A 24 110 108 CCDS HistoryNCBI Gene:90637Re-query CCDS DB by CCDS ID:5323.1Re-query CCDS DB by GeneID:90637See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5323.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000316495.8 ENSP00000314619.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000316495.8Link to Ensembl Protein Viewer:ENSP00000314619.3Re-query CCDS DB by Nucleotide ID:ENST00000316495Re-query CCDS DB by Protein ID:ENSP00000314619
Original member Current member NCBI NM_182491.4 NP_872297.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_182491.4Link to Protein Sequence:NP_872297.2Re-query CCDS DB by Nucleotide ID:NM_182491Re-query CCDS DB by Protein ID:NP_872297Link to BLAST:NP_872297.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_872297.2 145 Q8N6M9 145 100% 0 0

Chromosomal Locations for CCDS 5323.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 1153069 1153224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1155453 1155584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1157656 1157750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 1158158 1158212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (438 nt):
ATGGAGTTTCCTGATTTGGGGAAGCATTGTTCAGAAAAGACTTGCAAGCAGCTAGATTTTCTTCCAGTAA
AATGTGATGCATGTAAACAAGATTTCTGTAAAGATCATTTTCCATACGCTGCACATAAGTGTCCGTTTGC
ATTCCAGAAGGATGTTCACGTCCCAGTATGCCCACTCTGTAATACCCCCATCCCAGTAAAAAAGGGCCAG
ATACCAGACGTGGTGGTTGGTGATCACATTGACAGAGACTGTGACTCTCACCCTGGGAAGAAGAAAGAGA
AGATTTTTACATACCGTTGCTCAAAAGAGGGCTGCAAGAAGAAAGAGATGCTGCAGATGGTATGTGCCCA
ATGTCACGGCAACTTCTGTATCCAGCACAGACACCCTTTGGACCACAGCTGCAGACACGGGAGTCGCCCC
ACCATCAAAGCTGGGTGA

Translation (145 aa):
MEFPDLGKHCSEKTCKQLDFLPVKCDACKQDFCKDHFPYAAHKCPFAFQKDVHVPVCPLCNTPIPVKKGQ
IPDVVVGDHIDRDCDSHPGKKKEKIFTYRCSKEGCKKKEMLQMVCAQCHGNFCIQHRHPLDHSCRHGSRP
TIKAG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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