CCDS Report for Consensus CDS

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Report for CCDS53261.2 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
53261.2	Public	Homo sapiens	1	MIB2	24	110	108

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 53261.2

Original	Current	Source	Nucleotide ID	Protein ID	MANE	Status in CCDS	Seq. Status	Links
		EBI	ENST00000520777.6	ENSP00000428660.2		Accepted	alive
		NCBI	NM_001170686.4	NP_001164157.3		Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_001164157.3	951	Q96AX9-3	951	100%	0	0

Chromosomal Locations for CCDS 53261.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)

Genome Browser links:

Chromosome	Start	Stop
1	1623453	1623699
1	1623774	1623945
1	1624795	1624901
1	1624991	1625185
1	1625286	1625428
1	1625558	1625653
1	1626650	1626754
1	1626837	1626999
1	1627074	1627207
1	1627296	1627444
1	1627673	1627829
1	1628019	1628179
1	1628273	1628399
1	1628489	1628722
1	1629133	1629311
1	1629385	1629566
1	1629639	1629704
1	1630292	1630530

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2856 nt):
ATGGACCCAGACCCCCAGGCGGGCGTGCAGGTGGGCATGCGGGTGGTGCGCGGCGTGGACTGGAAGTGGG GCCAGCAGGACGGCGGCGAGGGCGGCGTGGGCACGGTGGTGGAGCTTGGCCGCCACGGCAGCCCCTCGAC ACCCGACCGCACAGTGGTCGTGCAGTGGGACCAGGGCACGCGCACCAACTACCGCGCCGGCTACCAGGGC GCGCACGACCTGCTGCTGTACGACAACGCCCAGATCGGCGTCCGGCACCCCAACATCATCTGTGACTGCT GCAAGAAGCACGGGCTGCGGGGGATGCGCTGGAAGTGCCGTGTGTGCCTGGACTACGACCTCTGCACGCA GTGCTACATGCACAACAAGCATGAGCTCGCCCACGCCTTCGACCGCTACGAGACCGCTCACTCGCGCCCT GTCACACTGAGTCCCCGCCAGGGCCTCCCGAGGATCCCACTAAGGGGCATCTTCCAGGGAGCGAAGGTGG TGCGAGGCCCCGACTGGGAGTGGGGCTCACAGGATGGAGGGGAAGGGAAACCGGGCCGTGTGGTGGACAT CCGTGGCTGGGATGTGGAGACAGGCCGGAGTGTGGCCAGCGTGACGTGGGCTGATGGTACCACCAATGTG TACCGTGTGGGCCACAAGGGCAAGGTGGACCTCAAGTGTGTGGGCGAGGCAGCGGGCGGCTTCTACTACA AGGACCACCTCCCAAGGCTCGGCAAGCCGGCGGAGCTGCAGCGCAGGGTGAGTGCTGACAGCCAGCCCTT CCAGCACGGGGACAAGGTCAAGTGTCTGCTGGACACTGATGTCCTGCGGGAGATGCAGGAAGGCCACGGC GGCTGGAACCCCAGGATGGCGGAGACGGGCACCGTGCATCGTATCACGGACCGCGGGGACGTGCGCGTGC AGTTCAACCACGAGACGCGCTGGACCTTCCACCCCGGGGCGCTCACCAAGCACCACTCCTTCTGGGTGGG CGACGTGGTCCGGGTCATCGGCGACCTTGACACAGTGAAGCGGCTGCAGGCTGGGCATGGCGAGTGGACG GACGACATGGCCCCTGCCCTGGGCCGCGTCGGGAAGGTGGTGAAAGTGTTTGGAGACGGGAACCTGCGTG TAGCAGTCGCTGGTCAGCGGTGGACCTTCAGCCCCTCCTGCCTGGTGGCCTACCGGCCCGAGGAGGATGC CAACCTGGACGTGGCCGAGCGCGCCCGGGAGAACAAAAGCTCACTGAGCGTGGCCCTGGACAAGCTTCGG GCCCAGAAGAGTGACCCAGAGCACCCGGGAAGGCTGGTGGTGGAGGTGGCGCTGGGTAACGCAGCCCGGG CTCTGGACCTGCTGCGGAGGCGCCCAGAGCAGGTGGACACCAAGAACCAAGGCAGGACCGCTCTGCAAGT GGCTGCCTACCTGGGCCAGGTGGAGTTGATACGGCTGCTGCTACAAGCCAGGGCGGGCGTGGACCTGCCG GACGACGAGGGCAACACGGCACTGCACTACGCGGCCCTGGGGAACCAGCCCGAGGCCACCAGGGTGCTCC TGAGTGCTGGGTGCCGGGCGGACGCCATCAACAGCACCCAGAGCACAGCACTGCACGTGGCCGTGCAGAG GGGCTTCCTGGAGGTGGTGCGGGCCCTGTGTGAGCGCGGCTGTGACGTCAACCTGCCCGACGCCCACTCG GACACGCCCCTGCACTCCGCCATCTCGGCGGGCACTGGAGCCAGCGGCATTGTCGAGGTCCTCACGGAGG TGCCAAACATCGATGTTACCGCCACCAACAGCCAGGGTTTCACCCTGCTGCACCATGCCTCCCTCAAGGG TCACGCGCTAGCTGTGAGAAAGATTCTGGCTCGGGCGCGGCAGCTGGTGGACGCCAAGAAGGAGGACGGC TTCACGGCGCTGCATCTGGCTGCCCTCAACAACCACCGCGAGGTGGCCCAGATCCTCATCCGGGAGGGCC GCTGTGACGTGAACGTGCGCAACCGGAAGCTGCAGTCCCCGCTGCATCTCGCCGTGCAACAGGCCCACGT GGGGCTGGTGCCGCTACTGGTGGACGCTGGGTGCAGTGTCAACGCCGAGGACGAGGAGGGGGACACAGCC CTGCACGTGGCGCTGCAGCGTCATCAGCTGCTGCCCCTGGTGGCTGATGGGGCCGGGGGGGACCCAGGGC CCTTGCAGCTGCTGTCCAGGCTACAGGCCTCGGGCCTCCCCGGCAGCGCGGAGCTGACGGTGGGCGCGGC GGTCGCCTGCTTCCTGGCGCTGGAGGGCGCCGACGTGAGCTACACCAACCACCGCGGTCGGAGCCCGCTG GACCTGGCCGCCGAGGGTCGCGTGCTCAAGGCCCTTCAGGGCTGCGCCCAGCGCTTCCGGGAGCGGCAGG CGGGCGGGGGCGCGGCCCCGGGCCCCAGGCAAACGCTCGGGACCCCCAACACCGTGACGAACCTGCACGT GGGCGCCGCGCCGGGGCCCGAGGCCGCTGAGTGCCTGGTGTGCTCCGAGCTGGCGCTGCTGGTGCTGTTC TCGCCGTGCCAGCACCGCACCGTGTGTGAGGAGTGCGCGCGCAGGATGAAGAAGTGCATCAGGTGCCAGG TGGTCGTCAGCAAGAAACTGCGCCCAGACGGCTCTGAGGTGGCGAGCGCCGCCCCCGCCCCCGGCCCGCC GCGCCAGCTGGTGGAGGAGCTGCAGAGCCGCTACCGGCAGATGGAGGAACGCATCACCTGCCCCATCTGC ATCGACAGCCACATCCGCCTCGTGTTCCAGTGCGGCCACGGCGCATGCGCCCCCTGCGGCTCCGCGCTCA GCGCCTGCCCCATCTGCCGCCAGCCCATCCGCGACCGCATCCAGATCTTCGTGTGA
Translation (951 aa):
MDPDPQAGVQVGMRVVRGVDWKWGQQDGGEGGVGTVVELGRHGSPSTPDRTVVVQWDQGTRTNYRAGYQG AHDLLLYDNAQIGVRHPNIICDCCKKHGLRGMRWKCRVCLDYDLCTQCYMHNKHELAHAFDRYETAHSRP VTLSPRQGLPRIPLRGIFQGAKVVRGPDWEWGSQDGGEGKPGRVVDIRGWDVETGRSVASVTWADGTTNV YRVGHKGKVDLKCVGEAAGGFYYKDHLPRLGKPAELQRRVSADSQPFQHGDKVKCLLDTDVLREMQEGHG GWNPRMAETGTVHRITDRGDVRVQFNHETRWTFHPGALTKHHSFWVGDVVRVIGDLDTVKRLQAGHGEWT DDMAPALGRVGKVVKVFGDGNLRVAVAGQRWTFSPSCLVAYRPEEDANLDVAERARENKSSLSVALDKLR AQKSDPEHPGRLVVEVALGNAARALDLLRRRPEQVDTKNQGRTALQVAAYLGQVELIRLLLQARAGVDLP DDEGNTALHYAALGNQPEATRVLLSAGCRADAINSTQSTALHVAVQRGFLEVVRALCERGCDVNLPDAHS DTPLHSAISAGTGASGIVEVLTEVPNIDVTATNSQGFTLLHHASLKGHALAVRKILARARQLVDAKKEDG FTALHLAALNNHREVAQILIREGRCDVNVRNRKLQSPLHLAVQQAHVGLVPLLVDAGCSVNAEDEEGDTA LHVALQRHQLLPLVADGAGGDPGPLQLLSRLQASGLPGSAELTVGAAVACFLALEGADVSYTNHRGRSPL DLAAEGRVLKALQGCAQRFRERQAGGGAAPGPRQTLGTPNTVTNLHVGAAPGPEAAECLVCSELALLVLF SPCQHRTVCEECARRMKKCIRCQVVVSKKLRPDGSEVASAAPAPGPPRQLVEELQSRYRQMEERITCPIC IDSHIRLVFQCGHGACAPCGSALSACPICRQPIRDRIQIFV

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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