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Report for CCDS53990.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
53990.1 Public Homo sapiens 16 MARF1 24 110 108 CCDS HistoryNCBI Gene:9665Re-query CCDS DB by CCDS ID:53990.1Re-query CCDS DB by GeneID:9665See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 53990.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000551742.5 ENSP00000450309.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000551742.5Link to Ensembl Protein Viewer:ENSP00000450309.1Re-query CCDS DB by Nucleotide ID:ENST00000551742Re-query CCDS DB by Protein ID:ENSP00000450309
Original member Current member NCBI NM_001184998.2 NP_001171927.1 Accepted alive Link to Nucleotide Sequence:NM_001184998.2Link to Protein Sequence:NP_001171927.1Re-query CCDS DB by Nucleotide ID:NM_001184998Re-query CCDS DB by Protein ID:NP_001171927Link to BLAST:NP_001171927.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171927.1 1742 Q9Y4F3-5 1742 100% 0 0

Chromosomal Locations for CCDS 53990.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 15596693 15596937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15598854 15599024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15600428 15600553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15600641 15600701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15601991 15602203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15604168 15604398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15608291 15608518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15609523 15609725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15610975 15611108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15611592 15611734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15612557 15612777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15615830 15616005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15617052 15617171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15617299 15617535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15620451 15620531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15621733 15621911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15622934 15623126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15624769 15624927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15625016 15625173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15625372 15625797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15630332 15630504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15631381 15631498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15633617 15633843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15634757 15634931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15635656 15636342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15639090 15639233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5229 nt):
ATGATGGAAGGAAACGGAACTGAGAACTCCTGCAGTAGAACACGTGGATGGCTTCAACAAGATAATGATG
CTAAGCCATGGCTTTGGAAATTCTCTAATTGCTTTTCTCGTCCTGAGCAGACGCTGCCACATAGTCCCCA
AACGAAAGAGTACATGGAGAACAAGAAAGTTGCTGTGGAACTAAAGGATGTACCATCACCCCTTCATGCT
GGCTCTAAGCTTTTTCCAGCAGTCCCACTTCCTGATATTCGTTCTCTTCAGCAGCCTAAAATACAGCTTT
CTTCTGTCCCCAAAGTAAGCTGCTGTGCTCATTGCCCTAATGAACCCTCCACTTCGCCAATGCGTTTTGG
TGGTGGTGGTGGCGGTAGCGGAGGTACCAGTAGCTTGATTCACCCGGGCGCACTGTTAGACTCGCAAAGC
ACCAGGACAATCACGTGTCAGGTAGGGTCAGGGTTTGCTTTCCAGTCTGCATCTTCACTCCAGAATGCCT
CAGCTAGGAACAATTTGGCAGGCATTGCAAGTGACTTTCCCAGCATGTGTCTAGAGAGTAACCTGTCTTC
CTGCAAACACCTGCCCTGTTGTGGAAAACTCCACTTCCAGTCATGTCATGGTAATGTGCACAAGCTGCAT
CAGTTTCCGAGTCTGCAGGGCTGCACCTCCGCTGGCTATTTCCCCTGTTCTGATTTCACAAGCGGGGCTC
CAGGGCATTTGGAAGAGCACATTTCACAGTCGGAGCTAACGCCTCACTTGTGCACCAACTCTTTGCACCT
TAATGTGGTACCTCCGGTTTGTTTAAAGGGCTCACTTTACTGCGAAGACTGTCTAAACAAGCCAGCAAGA
AATAGCATAATCGATGCGGCTAAAGTCTGGCCAAATATACCACCTCCAAATACTCAACCTGCACCTCTTG
CTGTCCCTCTGTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGACCAG
TCTAGGCAAAGCTGCTTCAAAATTTGGGTCACCAGAAGTTGCAGTAGCTGGACAGGTGCTAGAAAACTTA
CCCCCCATTGGAGTTTTTTGGGATATTGAAAACTGCTCCGTTCCCTCTGGCCGGTCAGCAACTGCTGTTG
TGCAAAGAATCCGTGAGAAGTTTTTTAAAGGCCACAGAGAAGCAGAATTCATCTGTGTATGTGACATCAG
TAAAGAAAACAAGGAAGTTATTCAAGAGCTGAATAATTGCCAGGTAACCGTTGCCCACATCAATGCTACT
GCAAAGAATGCCGCTGATGATAAACTGCGGCAGAGTCTCCGCAGATTTGCAAATACACACACTGCTCCAG
CCACAGTGGTTCTTGTGTCAACTGATGTCAATTTTGCATTGGAACTTAGTGACCTGAGACACAGGCATGG
TTTCCACATTATTTTGGTCCATAAAAACCAGGCCTCAGAAGCACTGCTGCATCATGCTAACGAGCTGATC
AGATTTGAAGAGTTCATTTCCGACTTGCCCCCCAGGTTACCACTAAAAATGCCATGCCACACTCTGCTCT
ATGTTTATAACCTACCAGCAAATAAGGATGGCAAGAGCGTCAGCAACAGGCTCAGACGCCTGTCCGATAA
TTGTGGTGGGAAAGTGCTGAGTATCACAGGCTGCAGTGCAATTCTCCGCTTCATAAACCAAGATAGTGCA
GAGCGCGCTCAGAAGCGAATGGAAAACGAAGATGTCTTTGGTAATAGGATCATTGTGTCATTTACTCCAA
AAAATAGAGAACTCTGTGAAACAAAGAGTTCAAATGCAATTGCTGATAAAGTGAAGTCTCCCAAAAAACT
TAAGAATCCAAAATTGTGCCTCATCAAAGATGCAAGTGAACAATCTTCCAGTGCCAAAGCCACGCCTGGA
AAAGGGTCACAGGCAAATTCTGGATCTGCTACAAAAAATACAAATGTTAAAAGTTTACAGGAGCTGTGCC
GCATGGAGTCAAAAACTGGTCATAGAAACAGTGAGCACCAGCAAGGTCACCTGAGGCTGGTCGTACCCAC
TCACGGTAACTCAAGTGCTGCAGTGTCGACGCCGAAAAACTCGGGGGTGGCAGAACCCGTTTACAAAACC
AGTCAGAAAAAGGAGAACCTCAGTGCCCGAAGTGTTACCAGTTCTCCTGTAGAGAAAAAAGATAAAGAGG
AGACTGTATTCCAAGTGAGTTACCCGTCTGCTTTTAGCAAGTTAGTTGCATCCAGGCAAGTCAGTCCTCT
GCTCGCATCTCAGTCTTGGTCTTCTAGCAGGAGTATGTCTCCAAACCTTTTAAACAGAGCATCCCCGCTT
GCTTTCAACATTGCAAATTCGAGCAGCGAAGCCGACTGCCCAGACCCATTTGCAAATGGTGCTGATGTCC
AAGTCAGCAACATAGACTACAGATTATCCCGGAAGGAGCTGCAGCAGCTCCTGCAGGAAGCATTTGCCAG
GCATGGCAAGGTGAAGAGTGTTGAGCTCAGCCCCCATACAGATTATCAACTCAAGGCTGTTGTGCAAATG
GAAAACTTACAAGATGCGATCGGTGCAGTGAATAGCCTCCACAGATACAAAATTGGCAGCAAAAAGATCC
TGGTCTCACTTGCCACCGGGGCTGCCAGCAAATCACTCTCTTTACTGAGTGCAGAAACAATGTCTGTTCT
TCAGGATGCCCCTGCCTGTTGCCTGCCTCTGTTTAAATTTACAGATATCTATGAAAAAAAGTTTGGACAC
AAGTTGAATGTGTCAGATCTATATAAATTAACAGACACGGTCGCAATCCGTGAACAAGGAAACGGACGGC
TGGTGTGTCTCCTACCCAGCAGTCAGGCCCGCCAGAGCCCCTTGGGGTCTTCCCAGTCACACGACGGCTC
CTCCACGAATTGCAGCCCAATTATATTTGAAGAGTTAGAATATCACGAGCCTGTCTGCAGACAGCATTGT
TCCAATAAGGATTTCAGCGAACATGAATTTGATCCAGACTCTTACAAGATTCCTTTTGTGATTCTTTCTT
TGAAGACATTTGCGCCCCAGGTTCACAGTCTTCTCCAGACCCACGAGGGCACCGTGCCTTTATTGAGCTT
TCCAGATTGTTACATTGCAGAGTTTGGCGATCTAGAAGTAGTGCAAGAAAACCAAGGAGGTGTTCCCTTA
GAACACTTCATTACCTGTGTTCCAGGTGTAAACATTGCCACTGCTCAGAATGGCATCAAAGTGGTTAAAT
GGATTCACAACAAGCCCCCGCCTCCCAACACTGACCCTTGGCTTCTGCGTTCGAAGAGTCCTGTAGGTAA
CCCCCAGCTGATCCAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATACCC
ATCAGTCATTTCATCCCATCCTATCACCATCATTTTGCAAAGCAGTGCCGAGTGTCAGACTACGGATACT
CCAAGCTGATTGAGTTATTAGAAGCAGTGCCTCATGTATTGCAGATTCTTGGAATGGGCTCCAAACGTCT
GCTGACCCTTACCCACAGGGCCCAGGTGAAGCGCTTTACTCAGGATTTACTAAAACTTCTCAAATCCCAG
GCCAGCAAACAGGTCATTGTGAGAGAATTCTCACAGGCTTATCACTGGTGTTTCTCAAAGGACTGGGATG
TCACTGAATATGGTGTTTGTGAGTTGATTGACATCGTATCAGAGATTCCAGACACAACCATCTGCTTGTC
CCAACAAGATAATGAAATGGTGATTTGTATCCCCAAAAGAGAACGCACTCAGGATGAAATAGAAAGGACA
AAACAGTTCTCCAAGGATGTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAAT
TTATCCCTTCTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTTACCAAACTACT
TGAACTTTTTGAAGCCATACCTGATACTTTACAAGTATTGGAATGTGGAGAAGAAAAGATCCTTACTCTG
ACAGAGGTGGAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACT
GCCTTATGATGACAGATCTCCTTACAGAATATGCTAAAACTTTTGGTTATACATTTCGTCTCCAAGACTA
TGATGTCAGTTCCATTTCGGCTTTAACTCAGAAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCT
GGCAGACAGATTCAGCTGATCAACCGAAAGTCTCTGCGATCTCTCACTGCCCAGTTGCTGGTATTGTTGA
TGTCTTGGGAAGGAACCACCCATCTTTCTGTTGAGGAGCTCAAGAGACATTACGAAAGTACCCACAACAC
TCCCCTTAACCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCTGAAGAGCCTGCCATACTTGGTT
GAGGTTTTCACTAATGATAAGATGGAAGAATGTGTGAAGCTCACAAGTCTGTATTTGTTTGCAAAGAATG
TGCGGTCTTTACTTCATACTTACCACTACCAGCAGATTTTCCTTCATGAGTTTTCCATGGCCTATACCAA
GTATGTCGGAGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATT
CCACAGGTGGTCTGGATAAAAGGACATGGTCATAAGAGAATTGTAGTGTTAAAAAATGACATGAAAAGTC
GTTTGAGTTCACTCAGTCTCTCCCCTGCCAATCATGAAAACCAGCCCTCGGAGGGCGAGCGCATCCTGGA
GGTGCCCGAATCGCACACAGCCTCGGAACTCAAGCTTGGAGCTGACGGCAGTGGGCCCAGTCACACAGAG
CAGGAGCTTCTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTGC
CGTCCCCTCAGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGCGCCC
TCAAGAGCCTTCTGAAATTATGATTTTAAACCAAGAAGAAAAAATGGAGATTCCAATACCAGGAAAGAGC
AAAACTCTGACCTCTGACTCCAGCTCGTCCTGCATCTCAGCAGCTGTCCCCGTGCCTCCCTGCCCCTCCT
CGGAAACCTCCGAGTCACTGCTCAGCAAGGACCCCGTGGAAAGCCCGGCCAAAAAGCAACCCAAAAATAG
AGTCAAATTGGCAGCCAACTTTTCCTTAGCACCTATAACCAAGCTTTAA

Translation (1742 aa):
MMEGNGTENSCSRTRGWLQQDNDAKPWLWKFSNCFSRPEQTLPHSPQTKEYMENKKVAVELKDVPSPLHA
GSKLFPAVPLPDIRSLQQPKIQLSSVPKVSCCAHCPNEPSTSPMRFGGGGGGSGGTSSLIHPGALLDSQS
TRTITCQVGSGFAFQSASSLQNASARNNLAGIASDFPSMCLESNLSSCKHLPCCGKLHFQSCHGNVHKLH
QFPSLQGCTSAGYFPCSDFTSGAPGHLEEHISQSELTPHLCTNSLHLNVVPPVCLKGSLYCEDCLNKPAR
NSIIDAAKVWPNIPPPNTQPAPLAVPLCNGCGTKGTGKETTLLLATSLGKAASKFGSPEVAVAGQVLENL
PPIGVFWDIENCSVPSGRSATAVVQRIREKFFKGHREAEFICVCDISKENKEVIQELNNCQVTVAHINAT
AKNAADDKLRQSLRRFANTHTAPATVVLVSTDVNFALELSDLRHRHGFHIILVHKNQASEALLHHANELI
RFEEFISDLPPRLPLKMPCHTLLYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSITGCSAILRFINQDSA
ERAQKRMENEDVFGNRIIVSFTPKNRELCETKSSNAIADKVKSPKKLKNPKLCLIKDASEQSSSAKATPG
KGSQANSGSATKNTNVKSLQELCRMESKTGHRNSEHQQGHLRLVVPTHGNSSAAVSTPKNSGVAEPVYKT
SQKKENLSARSVTSSPVEKKDKEETVFQVSYPSAFSKLVASRQVSPLLASQSWSSSRSMSPNLLNRASPL
AFNIANSSSEADCPDPFANGADVQVSNIDYRLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQM
ENLQDAIGAVNSLHRYKIGSKKILVSLATGAASKSLSLLSAETMSVLQDAPACCLPLFKFTDIYEKKFGH
KLNVSDLYKLTDTVAIREQGNGRLVCLLPSSQARQSPLGSSQSHDGSSTNCSPIIFEELEYHEPVCRQHC
SNKDFSEHEFDPDSYKIPFVILSLKTFAPQVHSLLQTHEGTVPLLSFPDCYIAEFGDLEVVQENQGGVPL
EHFITCVPGVNIATAQNGIKVVKWIHNKPPPPNTDPWLLRSKSPVGNPQLIQFSREVIDLLKSQPSCVIP
ISHFIPSYHHHFAKQCRVSDYGYSKLIELLEAVPHVLQILGMGSKRLLTLTHRAQVKRFTQDLLKLLKSQ
ASKQVIVREFSQAYHWCFSKDWDVTEYGVCELIDIVSEIPDTTICLSQQDNEMVICIPKRERTQDEIERT
KQFSKDVVDLLRHQPHFRMPFNKFIPSYHHHFGRQCKLAYYGFTKLLELFEAIPDTLQVLECGEEKILTL
TEVERFKALAAQFVKLLRSQKDNCLMMTDLLTEYAKTFGYTFRLQDYDVSSISALTQKLCHVVKVADIES
GRQIQLINRKSLRSLTAQLLVLLMSWEGTTHLSVEELKRHYESTHNTPLNPCEYGFMTLTELLKSLPYLV
EVFTNDKMEECVKLTSLYLFAKNVRSLLHTYHYQQIFLHEFSMAYTKYVGETLQPKTYGHSSVEELLGAI
PQVVWIKGHGHKRIVVLKNDMKSRLSSLSLSPANHENQPSEGERILEVPESHTASELKLGADGSGPSHTE
QELLRLTDDSPVDLLCAPVPSCLPSPQLRPDPVILQSADLIQFEERPQEPSEIMILNQEEKMEIPIPGKS
KTLTSDSSSSCISAAVPVPPCPSSETSESLLSKDPVESPAKKQPKNRVKLAANFSLAPITKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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