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Report for CCDS54800.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54800.1 Public Homo sapiens 4 ADAD1 24 110 108 CCDS HistoryNCBI Gene:132612Re-query CCDS DB by CCDS ID:54800.1Re-query CCDS DB by GeneID:132612See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54800.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000388724.6 ENSP00000373376.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000388724.6Link to Ensembl Protein Viewer:ENSP00000373376.2Re-query CCDS DB by Nucleotide ID:ENST00000388724Re-query CCDS DB by Protein ID:ENSP00000373376
Original member Current member NCBI NM_001159285.2 NP_001152757.1 Accepted alive Link to Nucleotide Sequence:NM_001159285.2Link to Protein Sequence:NP_001152757.1Re-query CCDS DB by Nucleotide ID:NM_001159285Re-query CCDS DB by Protein ID:NP_001152757Link to BLAST:NP_001152757.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001152757.1 565 Q96M93-2 565 100% 0 0

Chromosomal Locations for CCDS 54800.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 122380070 122380241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122380992 122381180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122383799 122383966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122393589 122393657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122396252 122396377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122407908 122408031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122411255 122411392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122412580 122412809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122415379 122415616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122421261 122421390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 122429626 122429739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1698 nt):
ATGGCTAGCAACAATCATTGGTTTCAGAGTTCGCAGGTCCCCAGCTTTGCCCAGATGCTGAAAAAGAACC
TGCCAGTTCAACCAGCGACAAAGACGATAACTACACCCACAGGATGGTCCTCAGAAAGTTACGGCCTGTC
CAAGATGGCATCCAAGGTTACGCAAGTAACGGGTAATTTTCCAGAGCCGTTGCTTTCCAAGAATCTTTCA
TCTATTTCAAATCCTGTCCTTCCTCCAAAAAAAATACCTAAGGAATTTATAATGAAATACAAACGTGGAG
AGATAAATCCTGTGTCAGCCTTGCACCAGTTTGCACAAATGCAGCGAGTTCAGCTTGACCTTAAGGAAAC
TGTGACAACAGGTAATGTTATGGGACCATATTTTGCCTTTTGTGCTGTGGTGGATGGTATTCAGTACAAG
ACTGGACTGGGACAAAATAAAAAGGAGTCTAGATCCAATGCAGCAAAATTAGCTCTTGATGAGCTTCTAC
AACTGGATGAACCTGAACCACGAATTTTAGAAACATCAGGTCCTCCTCCTTTCCCTGCAGAACCTGTTGT
TTTATCTGAACTAGCATATGTTTCAAAAGTACATTATGAAGGGAGACATATTCAATATGCAAAGATTTCA
CAGATCGTTAAAGAAAGATTTAATCAACTAATTTCTAATCGTTCAGAATACCTGAAATATAGCAGTTCAT
TGGCTGCTTTTATAATTGAAAGAGCTGGACAACATGAGGTTGTAGCTATAGGCACAGGTGAATACAATTA
CAGCCAGGACATTAAGCCAGATGGAAGAGTATTGCATGACACTCATGCTGTTGTTACAGCAAGAAGGTCT
CTTCTTAGCAAAAATCCTGCTATGATGGAAAAATCAATATTTTGTACAGAACCAACTTCTAATCTACTCA
CTCTTAAACAGAATATCAACATTTGCCTTTACATGAACCAGTTGCCTAAAGGATCAGCCCAGATTAAGTC
ACAGTTACGTCTTAATCCACATTCTATATCTGCATTTGAAGCCAATGAAGAACTCTGTCTCCACGTGGCT
GTTGAAGGCAAAATTTATCTGACTGTTTACTGTCCTAAAGATGGTGTTAATAGAATAAGCAGTATGTCCT
CAAGTGACAAATTGACCAGATGGGAAGTGCTTGGTGTACAGGGAGCATTGCTGAGTCATTTTATACAGCC
AGTTTACATCAGCAGTATACTTATTGGTGATGGGAATTGCAGTGATACCAGAGGCTTAGAAATCGCTATA
AAGCAACGTGTTGATGATGCACTCACTTCAAAACTTCCAATGTTTTACTTAGTCAACAGACCTCATATTA
GTTTAGTACCCTCTGCATATCCCCTTCAAATGAACTTGGAATATAAATTTCTGAGTCTGAATTGGGCACA
AGGAGATGTTTCTTTGGAGATTGTGGATGGCCTGAGTGGGAAGATCACTGAAAGTTCCCCATTTAAAAGT
GGTATGTCAATGGCAAGTCGGCTTTGTAAGGCTGCAATGTTAAGTCGGTTTAACCTGCTTGCCAAAGAAG
CTAAAAAAGAATTACTTGAAGCTGGTACATATCATGCAGCTAAGTGTATGTCTGCCTCCTATCAAGAAGC
TAAATGTAAGTTGAAATCCTACTTACAACAACATGGCTATGGATCCTGGATTGTGAAATCTCCCTGCATA
GAGCAATTTAACATGTGA

Translation (565 aa):
MASNNHWFQSSQVPSFAQMLKKNLPVQPATKTITTPTGWSSESYGLSKMASKVTQVTGNFPEPLLSKNLS
SISNPVLPPKKIPKEFIMKYKRGEINPVSALHQFAQMQRVQLDLKETVTTGNVMGPYFAFCAVVDGIQYK
TGLGQNKKESRSNAAKLALDELLQLDEPEPRILETSGPPPFPAEPVVLSELAYVSKVHYEGRHIQYAKIS
QIVKERFNQLISNRSEYLKYSSSLAAFIIERAGQHEVVAIGTGEYNYSQDIKPDGRVLHDTHAVVTARRS
LLSKNPAMMEKSIFCTEPTSNLLTLKQNINICLYMNQLPKGSAQIKSQLRLNPHSISAFEANEELCLHVA
VEGKIYLTVYCPKDGVNRISSMSSSDKLTRWEVLGVQGALLSHFIQPVYISSILIGDGNCSDTRGLEIAI
KQRVDDALTSKLPMFYLVNRPHISLVPSAYPLQMNLEYKFLSLNWAQGDVSLEIVDGLSGKITESSPFKS
GMSMASRLCKAAMLSRFNLLAKEAKKELLEAGTYHAAKCMSASYQEAKCKLKSYLQQHGYGSWIVKSPCI
EQFNM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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