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Report for CCDS55118.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55118.1 Public Homo sapiens 7 NSUN5 24 110 108 CCDS HistoryNCBI Gene:55695Re-query CCDS DB by CCDS ID:55118.1Re-query CCDS DB by GeneID:55695See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55118.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000428206.5 ENSP00000393081.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000428206.5Link to Ensembl Protein Viewer:ENSP00000393081.1Re-query CCDS DB by Nucleotide ID:ENST00000428206Re-query CCDS DB by Protein ID:ENSP00000393081
Original member Current member NCBI NM_001168348.3 NP_001161820.1 Accepted alive Link to Nucleotide Sequence:NM_001168348.3Link to Protein Sequence:NP_001161820.1Re-query CCDS DB by Nucleotide ID:NM_001168348Re-query CCDS DB by Protein ID:NP_001161820Link to BLAST:NP_001161820.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161820.1 391 Q96P11-5 391 100% 0 0

Chromosomal Locations for CCDS 55118.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 73303596 73303740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73303826 73304036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73304230 73304408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73304747 73304862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73304959 73305097 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73307394 73307502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73307583 73307643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73308431 73308553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 73308698 73308790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1176 nt):
ATGGGGCTGTATGCTGCAGCTGCAGGCGTGTTGGCCGGCGTGGAGAGCCGCCAGGGCTCTATCAAGGGGT
TGGTGTACTCCAGCAACTTCCAGAACGTGAAGCAGCTGTACGCGCTGGTGTGCGAAACGCAGCGCTACTC
CGCCGTGCTGGATGCTGTGATCGCCAGCGCCGGCCTCCTCCGTGCGGAGAAGAAGCTGCGGCCGCACCTG
GCCAAGGTTCATCGGGGTGTGAGCCGGAATGAGGACCTGTTGGAAGTGGGATCCAGGCCTGGTCCAGCCT
CCCAGCTGCCTCGATTTGTGCGTGTGAACACTCTCAAGACCTGCTCCGATGATGTAGTTGATTATTTCAA
GAGACAAGGTTTCTCCTATCAGGGTCGGGCTTCCAGCCTCGATGACTTACGAGCCCTCAAGGGGAAGCAT
TTTCTCCTGGACCCCTTGATGCCGGAGCTGCTGGTGTTTCCCGCCCAGACAGATCTGCATGAACACCCAC
TGTACCGGGCCGGACACCTCATTCTGCAGGACAGGGCCAGCTGTCTCCCAGCCATGCTGCTGGACCCCCC
GCCAGGCTCCCATGTCATCGATGCCTGTGCCGCCCCAGGCAATAAGACCAGTCACTTGGCTGCTCTTCTG
AAGAACCAAGGGAAGATCTTTGCCTTTGACCTGGATGCCAAGCGGCTGGCATCCATGGCCACGCTGCTGG
CCCGGGCTGGCGTCTCTTGCTGTGAACTGGCTGAGGAGGACTTCCTGGCGGTCTCCCCCTCGGATCCACG
CTACCATGAGGTCCACTACATCCTGCTGGATCCTTCCTGCAGTGGCTCGGGTATGCCGAGCAGACAGCTG
GAGGAGCCCGGGGCAGGCACACCTAGCCCGGTGCGTCTGCATGCCCTGGCAGGGTTCCAGCAGCGAGCCC
TGTGCCACGCACTCACTTTCCCTTCCCTGCAGCGGCTCGTCTACTCCACGTGCTCCCTCTGCCAGGAGGA
GAATGAAGACGTGGTGCGAGATGCGCTGCAGCAGAACCCGGGCGCCTTCAGGCTAGCTCCCGCCCTGCCT
GCCTGGCCCCACCGAGGCCTGAGCACGTTCCCGGGTGCCGAGCACTGCCTCCGGGCCTCCCCTGAGACCA
CACTCAGCAGTGGCTTCTTCGTTGCTGTAATTGAACGGGTCGAGGTGCCAAGGTGA

Translation (391 aa):
MGLYAAAAGVLAGVESRQGSIKGLVYSSNFQNVKQLYALVCETQRYSAVLDAVIASAGLLRAEKKLRPHL
AKVHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKH
FLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALL
KNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQL
EEPGAGTPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALP
AWPHRGLSTFPGAEHCLRASPETTLSSGFFVAVIERVEVPR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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