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Report for CCDS55269.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55269.1 Public Homo sapiens 8 RIMS2 24 110 108 CCDS HistoryNCBI Gene:9699Re-query CCDS DB by CCDS ID:55269.1Re-query CCDS DB by GeneID:9699See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55269.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000504942.6 ENSP00000427018.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000504942.6Link to Ensembl Protein Viewer:ENSP00000427018.3Re-query CCDS DB by Nucleotide ID:ENST00000504942Re-query CCDS DB by Protein ID:ENSP00000427018
Original member Current member NCBI NM_001100117.3 NP_001093587.1 Accepted alive Link to Nucleotide Sequence:NM_001100117.3Link to Protein Sequence:NP_001093587.1Re-query CCDS DB by Nucleotide ID:NM_001100117Re-query CCDS DB by Protein ID:NP_001093587Link to BLAST:NP_001093587.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001093587.1 1349 Q9UQ26-8 1349 100% 0 0

Chromosomal Locations for CCDS 55269.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 103500887 103501062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103697086 103697296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103766227 103766537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103885298 103886223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103910134 103910201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103912053 103912172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103915495 103915594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103916414 103916537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103918441 103918487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103921672 103921784 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103927842 103927889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103931263 103931393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103936551 103936722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103942773 103942926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103961065 103961133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103975350 103975506 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 103989305 103989421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104013442 104013621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104014506 104014615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104244916 104245057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104248701 104248813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104249487 104249588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104251024 104251163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 104251602 104251820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4050 nt):
ATGTCGGCTCCTGTCGGGCCCCGGGGCCGCCTGGCTCCCATCCCGGCGGCCTCTCAGCCGCCTCTGCAGC
CCGAGATGCCTGACCTCAGCCACCTCACGGAGGAGGAGAGGAAAATCATCCTGGCCGTCATGGATAGGCA
GAAGAAAGAAGAGGAGAAGGAGCAGTCCGTGCTCAAAAAACTGCATCAGCAGTTTGAAATGTATAAAGAG
CAGGTAAAGAAGATGGGAGAAGAATCACAGCAACAGCAAGAACAGAAGGGTGATGCGCCAACCTGTGGTA
TCTGCCACAAAACAAAGTTTGCTGATGGATGTGGCCATAACTGTTCATATTGCCAAACAAAGTTCTGTGC
TCGTTGTGGAGGTCGAGTGTCATTACGCTCAAACAAGGTTATGTGGGTATGTAATTTGTGCCGAAAACAA
CAAGAAATCCTCACTAAATCAGGAGCATGGTTTTATAATAGTGGATCTAATACACCACAGCAACCTGATC
AAAAGGTTCTTCGAGGGCTAAGAAATGAGGAGGCACCTCAGGAGAAGAAACCAAAACTACATGAGCAGAC
CCAGTTCCAAGGACCCTCAGGTGACTTATCTGTACCTGCAGTGGAGAAAAGTCGATCTCATGGGCTCACA
AGACAGCATTCTATTAAAAATGGGTCAGGCGTGAAGCATCACATTGCCAGTGACATAGCTTCAGACAGGA
AAAGAAGCCCATCTGTGTCCAGAGATCAGAATAGAAGATACGACCAAAGGGAAGAAAGAGAGGAATATTC
ACAGTATGCTACTTCGGATACCGCAATGCCTAGATCTCCATCAGATTATGCTGATAGGCGATCTCAACAT
GAACCTCAGTTTTATGAAGACTCTGATCATTTAAGTTATAGGGACTCCAACAGGAGAAGTCATAGGCATT
CCAAAGAATATATTGTAGATGATGAGGATGTGGAAAGCAGAGATGAATACGAAAGGCAAAGGAGAGAGGA
AGAGTACCAGTCACGCTACCGAAGTGATCCGAATTTGGCCCGTTATCCAGTAAAGCCACAACCCTATGAA
GAACAAATGCGGATCCATGCTGAAGTGTCCCGAGCACGGCATGAGAGAAGGCATAGTGATGTTTCTTTGG
CAAATGCTGATCTGGAAGATTCCAGGATTTCTATGCTAAGGATGGATCGACCATCAAGGCAAAGATCTAT
ATCAGAACGTAGAGCTGCCATGGAAAATCAGCGATCTTATTCAATGGAAAGAACTCGAGAGGCTCAGGGA
CCAAGTTCTTATGCACAAAGGACCACAAACCATAGTCCTCCTACCCCCAGGAGGAGTCCACTACCCATAG
ATAGACCAGACTTGAGGCGTACTGACTCACTACGGAAACAGCACCACTTAGATCCTAGCTCTGCTGTAAG
AAAAACAAAACGGGAAAAAATGGAAACAATGTTAAGGAATGATTCTCTCAGTTCAGACCAGTCAGAGTCA
GTGAGACCTCCACCACCAAAGCCTCATAAATCAAAGAAAGGCGGTAAAATGCGCCAGATTTCGTTGAGCA
GTTCAGAGGAGGAATTGGCTTCCACGCCTGAATATACAAGTTGTGATGATGTTGAGATTGAAAGTGAGAG
TGTAAGTGAAAAAGGAGACATGGATTACAACTGGTTGGATCATACGTCTTGGCATAGCAGTGAGGCATCC
CCAATGTCTTTGCACCCTGTAACCTGGCAACCATCTAAAGATGGAGATCGTTTAATTGGTCGCATTTTAT
TAAATAAGCGTCTAAAAGATGGAAGTGTACCTCGAGATTCAGGAGCAATGCTTGGCTTGAAGGTTGTAGG
AGGAAAGATGACTGAATCAGGTCGGCTTTGTGCATTTATTACTAAAGTAAAAAAAGGAAGTTTAGCTGAT
ACTGTAGGACATCTTAGACCAGGTGATGAAGTATTAGAATGGAATGGAAGACTACTGCAAGGAGCCACAT
TTGAGGAAGTGTACAACATCATTCTAGAATCCAAACCTGAACCACAAGTAGAACTTGTAGTTTCAAGGCC
TATTGGAGATATACCGCGAATACCTGATAGCACACATGCACAACTGGAGTCCAGTTCTAGCTCCTTTGAA
TCTCAAAAAATGGATCGTCCTTCTATTTCTGTTACCTCTCCCATGAGTCCTGGAATGTTGAGGGATGTCC
CACAGTTCTTATCAGGACAACTTTCAAGCCAAAGCCTTAGTAGAAGAACAACGCCTTTTGTTCCTAGGGT
TCAGATAAAACTATGGTTTGACAAGGTTGGTCACCAATTAATAGTTACAATTTTGGGAGCAAAAGATCTC
CCTTCCAGGGAAGATGGGAGGCCAAGGAATCCTTATGTTAAAATTTACTTTCTTCCAGACAGAAGTGATA
AAAACAAGAGAAGAACTAAAACAGTAAAGAAAACATTGGAACCCAAATGGAACCAAACATTCATTTATTC
TCCAGTCCACCGAAGAGAATTTCGGGAACGAATGCTAGAGATTACCCTTTGGGATCAAGCTCGTGTTCGA
GAGGAAGAAAGTGAATTCTTAGGCGAGATTTTAATTGAATTAGAAACAGCATTATTAGATGATGAGCCAC
ATTGGTACAAACTTCAGACGCATGATGTCTCTTCATTGCCACTTCCCCACCCTTCTCCATATATGCCACG
AAGACAGCTCCATGGAGAGAGCCCAACACGGAGGTTGCAAAGGTCAAAGAGAATAAGTGATAGTGAAGTC
TCTGACTATGACTGTGATGATGGAATTGGTGTAGTATCAGATTATCGACATGATGGTCGAGATCTTCAAA
GCTCAACATTATCAGTGCCAGAACAAGTAATGTCATCAAACCACTGTTCACCATCAGGGTCTCCTCATCG
AGTAGATGTTATAGGAAGGACTAGATCATGGTCACCCAGTGTCCCTCCTCCACAAAGTCGGAATGTGGAA
CAGGGGCTTCGAGGGACCCGCACTATGACCGGACATTATAATACAATTAGCCGAATGGACAGACATCGTG
TCATGGATGACCATTATTCTCCAGATAGAGACAGGGATTGTGAAGCAGCAGATAGACAGCCATATCACAG
ATCCAGATCAACAGAACAACGGCCTCTCCTTGAGCGGACCACCACCCGCTCCAGATCCACTGAACGTCCT
GATACAAACCTCATGAGGTCGATGCCTTCATTAATGACTGGAAGATCTGCCCCTCCTTCACCTGCCTTAT
CGAGGTCTCATCCTCGTACTGGGTCTGTCCAGACAAGCCCATCAAGTACTCCAGTCGCAGGACGAAGGGG
CCGACAGCTTCCACAGCTTCCACCAAAGGGAACGTTGGATAGAAAAGCAGGAGGTAAAAAACTAAGGAGC
ACTGTCCAAAGAAGTACAGAAACAGGCCTGGCCGTGGAAATGAGGAACTGGATGACTCGACAGGCAAGCC
GAGAGTCTACAGATGGTAGCATGAACAGCTACAGCTCAGAAGGAAATCTGATTTTCCCTGGTGTTCGCTT
GGCCTCTGATAGCCAGTTCAGTGATTTCCTGGATGGCCTTGGCCCTGCTCAGCTAGTGGGACGCCAGACT
CTGGCAACACCTGCAATGGGTGACATTCAGGTAGGAATGATGGACAAAAAGGGACAGCTGGAGGTAGAAA
TCATCCGGGCCCGTGGCCTTGTTGTAAAACCAGGTTCCAAGACACTGCCAGCACCGTATGTAAAAGTGTA
TCTATTAGATAACGGAGTCTGCATAGCCAAAAAGAAAACAAAAGTGGCAAGAAAAACGCTGGAACCCCTT
TACCAGCAGCTATTATCTTTCGAAGAGAGTCCACAAGGAAAAGTTTTACAGATCATCGTCTGGGGAGATT
ATGGCCGCATGGATCACAAATCTTTTATGGGAGTGGCCCAGATACTTTTAGATGAACTAGAGCTATCCAA
TATGGTGATCGGATGGTTCAAACTTTTCCCACCTTCCTCCCTAGTAGATCCAACCTTGGCCCCTCTGACA
AGAAGAGCTTCCCAATCATCTCTGGAAAGTTCAACTGGACCTTCTTACTCTCGTTCATAG

Translation (1349 aa):
MSAPVGPRGRLAPIPAASQPPLQPEMPDLSHLTEEERKIILAVMDRQKKEEEKEQSVLKKLHQQFEMYKE
QVKKMGEESQQQQEQKGDAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRKQ
QEILTKSGAWFYNSGSNTPQQPDQKVLRGLRNEEAPQEKKPKLHEQTQFQGPSGDLSVPAVEKSRSHGLT
RQHSIKNGSGVKHHIASDIASDRKRSPSVSRDQNRRYDQREEREEYSQYATSDTAMPRSPSDYADRRSQH
EPQFYEDSDHLSYRDSNRRSHRHSKEYIVDDEDVESRDEYERQRREEEYQSRYRSDPNLARYPVKPQPYE
EQMRIHAEVSRARHERRHSDVSLANADLEDSRISMLRMDRPSRQRSISERRAAMENQRSYSMERTREAQG
PSSYAQRTTNHSPPTPRRSPLPIDRPDLRRTDSLRKQHHLDPSSAVRKTKREKMETMLRNDSLSSDQSES
VRPPPPKPHKSKKGGKMRQISLSSSEEELASTPEYTSCDDVEIESESVSEKGDMDYNWLDHTSWHSSEAS
PMSLHPVTWQPSKDGDRLIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLAD
TVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRPIGDIPRIPDSTHAQLESSSSSFE
SQKMDRPSISVTSPMSPGMLRDVPQFLSGQLSSQSLSRRTTPFVPRVQIKLWFDKVGHQLIVTILGAKDL
PSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQARVR
EEESEFLGEILIELETALLDDEPHWYKLQTHDVSSLPLPHPSPYMPRRQLHGESPTRRLQRSKRISDSEV
SDYDCDDGIGVVSDYRHDGRDLQSSTLSVPEQVMSSNHCSPSGSPHRVDVIGRTRSWSPSVPPPQSRNVE
QGLRGTRTMTGHYNTISRMDRHRVMDDHYSPDRDRDCEAADRQPYHRSRSTEQRPLLERTTTRSRSTERP
DTNLMRSMPSLMTGRSAPPSPALSRSHPRTGSVQTSPSSTPVAGRRGRQLPQLPPKGTLDRKAGGKKLRS
TVQRSTETGLAVEMRNWMTRQASRESTDGSMNSYSSEGNLIFPGVRLASDSQFSDFLDGLGPAQLVGRQT
LATPAMGDIQVGMMDKKGQLEVEIIRARGLVVKPGSKTLPAPYVKVYLLDNGVCIAKKKTKVARKTLEPL
YQQLLSFEESPQGKVLQIIVWGDYGRMDHKSFMGVAQILLDELELSNMVIGWFKLFPPSSLVDPTLAPLT
RRASQSSLESSTGPSYSRS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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