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Report for CCDS55727.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55727.1 Public Homo sapiens 10 BBIP1 24 110 108 CCDS HistoryNCBI Gene:92482Re-query CCDS DB by CCDS ID:55727.1Re-query CCDS DB by GeneID:92482See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55727.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000448814.7 ENSP00000436622.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000448814.7Link to Ensembl Protein Viewer:ENSP00000436622.2Re-query CCDS DB by Nucleotide ID:ENST00000448814Re-query CCDS DB by Protein ID:ENSP00000436622
Original member Current member EBI ENST00000605742.5 ENSP00000474675.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000605742.5Link to Ensembl Protein Viewer:ENSP00000474675.1Re-query CCDS DB by Nucleotide ID:ENST00000605742Re-query CCDS DB by Protein ID:ENSP00000474675
Original member Current member EBI ENST00000652043.1 ENSP00000498430.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000652043.1Link to Ensembl Protein Viewer:ENSP00000498430.1Re-query CCDS DB by Nucleotide ID:ENST00000652043Re-query CCDS DB by Protein ID:ENSP00000498430
Original member Current member NCBI NM_001195305.3 NP_001182234.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001195305.3Link to Protein Sequence:NP_001182234.1Re-query CCDS DB by Nucleotide ID:NM_001195305Re-query CCDS DB by Protein ID:NP_001182234Link to BLAST:NP_001182234.1
Original member Current member NCBI NM_001195306.2 NP_001182235.1 Accepted alive Link to Nucleotide Sequence:NM_001195306.2Link to Protein Sequence:NP_001182235.1Re-query CCDS DB by Nucleotide ID:NM_001195306Re-query CCDS DB by Protein ID:NP_001182235Link to BLAST:NP_001182235.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001182234.1 92 A8MTZ0-1 92 100% 0 0
NP_001182235.1 92 A8MTZ0-1 92 100% 0 0

Chromosomal Locations for CCDS 55727.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 110900360 110900526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 110901538 110901612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 110918121 110918157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (279 nt):
ATGCTTAAAGCTGCAGCAAAAAGACCAGAACTTTCAGGAAAAAACACTATATCCAACAACTCAGATATGG
CAGAAGTGAAGTCAATGTTCCGGGAAGTTCTTCCAAAGCAAGGGCCACTGTTTGTGGAAGATATAATGAC
AATGGTGCTGTGTAAACCCAAACTTTTACCCTTAAAATCTCTGACTCTGGAAAAACTAGAGAAAATGCAT
CAAGCAGCACAGAATACAATTCGCCAACAAGAAATGGCAGAAAAGGATCAACGGCAAATAACCCACTGA

Translation (92 aa):
MLKAAAKRPELSGKNTISNNSDMAEVKSMFREVLPKQGPLFVEDIMTMVLCKPKLLPLKSLTLEKLEKMH
QAAQNTIRQQEMAEKDQRQITH


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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