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Report for CCDS55991.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55991.1 Public Homo sapiens 16 MARF1 24 110 108 CCDS HistoryNCBI Gene:9665Re-query CCDS DB by CCDS ID:55991.1Re-query CCDS DB by GeneID:9665See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55991.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000548025.5 ENSP00000449376.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000548025.5Link to Ensembl Protein Viewer:ENSP00000449376.1Re-query CCDS DB by Nucleotide ID:ENST00000548025Re-query CCDS DB by Protein ID:ENSP00000449376
Original member Current member NCBI NM_001184999.2 NP_001171928.1 Accepted alive Link to Nucleotide Sequence:NM_001184999.2Link to Protein Sequence:NP_001171928.1Re-query CCDS DB by Nucleotide ID:NM_001184999Re-query CCDS DB by Protein ID:NP_001171928Link to BLAST:NP_001171928.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171928.1 1739 Q9Y4F3-4 1739 100% 0 0

Chromosomal Locations for CCDS 55991.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 15596693 15596937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15598854 15599024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15600428 15600553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15600641 15600701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15601991 15602203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15604168 15604398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15608291 15608518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15609523 15609725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15610975 15611108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15611592 15611734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15612557 15612777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15615830 15616005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15617052 15617171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15617299 15617535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15620451 15620531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15621733 15621911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15622934 15623123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15624769 15624927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15625016 15625173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15625372 15625800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15630332 15630504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15631381 15631498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15633617 15633834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15634757 15634931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15635656 15636342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 15639090 15639233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5220 nt):
ATGATGGAAGGAAACGGAACTGAGAACTCCTGCAGTAGAACACGTGGATGGCTTCAACAAGATAATGATG
CTAAGCCATGGCTTTGGAAATTCTCTAATTGCTTTTCTCGTCCTGAGCAGACGCTGCCACATAGTCCCCA
AACGAAAGAGTACATGGAGAACAAGAAAGTTGCTGTGGAACTAAAGGATGTACCATCACCCCTTCATGCT
GGCTCTAAGCTTTTTCCAGCAGTCCCACTTCCTGATATTCGTTCTCTTCAGCAGCCTAAAATACAGCTTT
CTTCTGTCCCCAAAGTAAGCTGCTGTGCTCATTGCCCTAATGAACCCTCCACTTCGCCAATGCGTTTTGG
TGGTGGTGGTGGCGGTAGCGGAGGTACCAGTAGCTTGATTCACCCGGGCGCACTGTTAGACTCGCAAAGC
ACCAGGACAATCACGTGTCAGGTAGGGTCAGGGTTTGCTTTCCAGTCTGCATCTTCACTCCAGAATGCCT
CAGCTAGGAACAATTTGGCAGGCATTGCAAGTGACTTTCCCAGCATGTGTCTAGAGAGTAACCTGTCTTC
CTGCAAACACCTGCCCTGTTGTGGAAAACTCCACTTCCAGTCATGTCATGGTAATGTGCACAAGCTGCAT
CAGTTTCCGAGTCTGCAGGGCTGCACCTCCGCTGGCTATTTCCCCTGTTCTGATTTCACAAGCGGGGCTC
CAGGGCATTTGGAAGAGCACATTTCACAGTCGGAGCTAACGCCTCACTTGTGCACCAACTCTTTGCACCT
TAATGTGGTACCTCCGGTTTGTTTAAAGGGCTCACTTTACTGCGAAGACTGTCTAAACAAGCCAGCAAGA
AATAGCATAATCGATGCGGCTAAAGTCTGGCCAAATATACCACCTCCAAATACTCAACCTGCACCTCTTG
CTGTCCCTCTGTGTAATGGCTGTGGAACCAAAGGAACAGGGAAGGAGACCACGTTGTTATTGGCGACCAG
TCTAGGCAAAGCTGCTTCAAAATTTGAAGTTGCAGTAGCTGGACAGGTGCTAGAAAACTTACCCCCCATT
GGAGTTTTTTGGGATATTGAAAACTGCTCCGTTCCCTCTGGCCGGTCAGCAACTGCTGTTGTGCAAAGAA
TCCGTGAGAAGTTTTTTAAAGGCCACAGAGAAGCAGAATTCATCTGTGTATGTGACATCAGTAAAGAAAA
CAAGGAAGTTATTCAAGAGCTGAATAATTGCCAGGTAACCGTTGCCCACATCAATGCTACTGCAAAGAAT
GCCGCTGATGATAAACTGCGGCAGAGTCTCCGCAGATTTGCAAATACACACACTGCTCCAGCCACAGTGG
TTCTTGTGTCAACTGATGTCAATTTTGCATTGGAACTTAGTGACCTGAGACACAGGCATGGTTTCCACAT
TATTTTGGTCCATAAAAACCAGGCCTCAGAAGCACTGCTGCATCATGCTAACGAGCTGATCAGATTTGAA
GAGTTCATTTCCGACTTGCCCCCCAGGTTACCACTAAAAATGCCACAGTGCCACACTCTGCTCTATGTTT
ATAACCTACCAGCAAATAAGGATGGCAAGAGCGTCAGCAACAGGCTCAGACGCCTGTCCGATAATTGTGG
TGGGAAAGTGCTGAGTATCACAGGCTGCAGTGCAATTCTCCGCTTCATAAACCAAGATAGTGCAGAGCGC
GCTCAGAAGCGAATGGAAAACGAAGATGTCTTTGGTAATAGGATCATTGTGTCATTTACTCCAAAAAATA
GAGAACTCTGTGAAACAAAGAGTTCAAATGCAATTGCTGATAAAGTGAAGTCTCCCAAAAAACTTAAGAA
TCCAAAATTGTGCCTCATCAAAGATGCAAGTGAACAATCTTCCAGTGCCAAAGCCACGCCTGGAAAAGGG
TCACAGGCAAATTCTGGATCTGCTACAAAAAATACAAATGTTAAAAGTTTACAGGAGCTGTGCCGCATGG
AGTCAAAAACTGGTCATAGAAACAGTGAGCACCAGCAAGGTCACCTGAGGCTGGTCGTACCCACTCACGG
TAACTCAAGTGCTGCAGTGTCGACGCCGAAAAACTCGGGGGTGGCAGAACCCGTTTACAAAACCAGTCAG
AAAAAGGAGAACCTCAGTGCCCGAAGTGTTACCAGTTCTCCTGTAGAGAAAAAAGATAAAGAGGAGACTG
TATTCCAAGTGAGTTACCCGTCTGCTTTTAGCAAGTTAGTTGCATCCAGGCAAGTCAGTCCTCTGCTCGC
ATCTCAGTCTTGGTCTTCTAGGAGTATGTCTCCAAACCTTTTAAACAGAGCATCCCCGCTTGCTTTCAAC
ATTGCAAATTCGAGCAGCGAAGCCGACTGCCCAGACCCATTTGCAAATGGTGCTGATGTCCAAGTCAGCA
ACATAGACTACAGATTATCCCGGAAGGAGCTGCAGCAGCTCCTGCAGGAAGCATTTGCCAGGCATGGCAA
GGTGAAGAGTGTTGAGCTCAGCCCCCATACAGATTATCAACTCAAGGCTGTTGTGCAAATGGAAAACTTA
CAAGATGCGATCGGTGCAGTGAATAGCCTCCACAGATACAAAATTGGCAGCAAAAAGATCCTGGTCTCAC
TTGCCACCGGGGCTGCCAGCAAATCACTCTCTTTACTGAGTGCAGAAACAATGTCTGTTCTTCAGGATGC
CCCTGCCTGTTGCCTGCCTCTGTTTAAATTTACAGATATCTATGAAAAAAAGTTTGGACACAAGTTGAAT
GTGTCAGATCTATATAAATTAACAGACACGGTCGCAATCCGTGAACAAGGAAACGGACGGCTGGTGTGTC
TCCTACCCAGCAGTCAGGCCCGCCAGAGCCCCTTGGGGTCTTCCCAGTCACACGACGGCTCCTCCACGAA
TTGCAGCCCAATTATATTTGAAGAGTTAGAATATCACGAGCCTGTCTGCAGACAGCATTGTTCCAATAAG
GATTTCAGCGAACATGAATTTGATCCAGACTCTTACAAGATTCCTTTTGTGATTCTTTCTTTGAAGACAT
TTGCGCCCCAGGTTCACAGTCTTCTCCAGACCCACGAGGGCACCGTGCCTTTATTGAGCTTTCCAGATTG
TTACATTGCAGAGTTTGGCGATCTAGAAGTAGTGCAAGAAAACCAAGGAGGTGTTCCCTTAGAACACTTC
ATTACCTGTGTTCCAGGTGTAAACATTGCCACTGCTCAGAATGGCATCAAAGTGGTTAAATGGATTCACA
ACAAGCCCCCGCCTCCCAACACTGACCCTTGGCTTCTGCGTTCGAAGAGTCCTGTAGGTAACCCCCAGCT
GATCCAGTTCAGTAGAGAAGTGATTGACTTGCTGAAAAGCCAGCCATCTTGTGTCATACCCATCAGTCAT
TTCATCCCATCCTATCACCATCATTTTGCAAAGCAGTGCCGAGTGTCAGACTACGGATACTCCAAGCTGA
TTGAGTTATTAGAAGCAGTGCCTCATGTATTGCAGATTCTTGGAATGGGCTCCAAACGTCTGCTGACCCT
TACCCACAGGGCCCAGGTGAAGCGCTTTACTCAGGATTTACTAAAACTTCTCAAATCCCAGGCCAGCAAA
CAGGTCATTGTGAGAGAATTCTCACAGGCTTATCACTGGTGTTTCTCAAAGGACTGGGATGTCACTGAAT
ATGGTGTTTGTGAGTTGATTGACATCGTATCAGAGATTCCAGACACAACCATCTGCTTGTCCCAACAAGA
TAATGAAATGGTGATTTGTATCCCCAAAAGAGAACGCACTCAGGATGAAATAGAAAGGACAAAACAGTTC
TCCAAGGATGTCGTTGATTTGCTGCGTCACCAACCCCATTTCCGGATGCCCTTTAATAAATTTATCCCTT
CTTACCATCACCACTTTGGCCGGCAGTGCAAACTTGCGTACTATGGGTTTACCAAACTACTTGAACTTTT
TGAAGCCATACCTGATACTTTACAAGTATTGGAATGTGGAGAAGAAAAGATCCTTACTCTGACAGAGGTG
GAGCGGTTCAAAGCTCTAGCTGCCCAGTTTGTTAAACTCCTTCGGTCCCAAAAAGATAACTGCCTTATGA
TGACAGATCTCCTTACAGAATATGCTAAAACTTTTGGTTATACATTTCGTCTCCAAGACTATGATGTCAG
TTCCATTTCGGCTTTAACTCAGAAACTCTGCCATGTCGTGAAGGTTGCCGATATAGAATCTGGCAGACAG
ATTCAGCTGATCAACCGAAAGTCTCTGCGATCTCTCACTGCCCAGTTGCTGGTATTGTTGATGTCTTGGG
AAGGAACCACCCATCTTTCTGTTGAGGAGCTCAAGAGACATTACGAAAGTACCCACAACACTCCCCTTAA
CCCCTGTGAATATGGATTCATGACCTTGACCGAACTGCTGAAGAGCCTGCCATACTTGGTTGAGGTTTTC
ACTAATGATAAGATGGAAGAATGTGTGAAGCTCACAAGTCTGTATTTGTTTGCAAAGAATGTGCGGTCTT
TACTTCATACTTACCACTACCAGCAGATTTTCCTTCATGAGTTTTCCATGGCCTATACCAAGTATGTCGG
AGAAACTCTGCAGCCCAAGACCTACGGCCACAGCAGCGTGGAGGAGCTCTTGGGAGCAATTCCACAGGTG
GTCTGGATAAAAGGACATGGTCATAAGAGAATTGTAGTGTTAAAAAATGACATGAAAAGTCGTTTGAGTT
CACTCAGTCTCTCCCCTGCCAATCATGAAAACCAGCCCTCGGAGGGCGAGCGCATCCTGGAGGTGCCCGA
ATCGCACACAGCCTCGGAACTCAAGCTTGGAGCTGACGGCAGTGGGCCCAGTCACACAGAGCAGGAGCTT
CTCCGCCTGACCGACGACTCCCCCGTCGACCTCCTGTGTGCGCCTGTCCCCTCGTGCCTGCCGTCCCCTC
AGCTGAGACCAGACCCCGTTATCCTCCAATCTGCTGATCTCATTCAGTTTGAGGAGCGCCCTCAAGAGCC
TTCTGAAATTATGATTTTAAACCAAGAAGAAAAAATGGAGATTCCAATACCAGGAAAGAGCAAAACTCTG
ACCTCTGACTCCAGCTCGTCCTGCATCTCAGCAGCTGTCCCCGTGCCTCCCTGCCCCTCCTCGGAAACCT
CCGAGTCACTGCTCAGCAAGGACCCCGTGGAAAGCCCGGCCAAAAAGCAACCCAAAAATAGAGTCAAATT
GGCAGCCAACTTTTCCTTAGCACCTATAACCAAGCTTTAA

Translation (1739 aa):
MMEGNGTENSCSRTRGWLQQDNDAKPWLWKFSNCFSRPEQTLPHSPQTKEYMENKKVAVELKDVPSPLHA
GSKLFPAVPLPDIRSLQQPKIQLSSVPKVSCCAHCPNEPSTSPMRFGGGGGGSGGTSSLIHPGALLDSQS
TRTITCQVGSGFAFQSASSLQNASARNNLAGIASDFPSMCLESNLSSCKHLPCCGKLHFQSCHGNVHKLH
QFPSLQGCTSAGYFPCSDFTSGAPGHLEEHISQSELTPHLCTNSLHLNVVPPVCLKGSLYCEDCLNKPAR
NSIIDAAKVWPNIPPPNTQPAPLAVPLCNGCGTKGTGKETTLLLATSLGKAASKFEVAVAGQVLENLPPI
GVFWDIENCSVPSGRSATAVVQRIREKFFKGHREAEFICVCDISKENKEVIQELNNCQVTVAHINATAKN
AADDKLRQSLRRFANTHTAPATVVLVSTDVNFALELSDLRHRHGFHIILVHKNQASEALLHHANELIRFE
EFISDLPPRLPLKMPQCHTLLYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSITGCSAILRFINQDSAER
AQKRMENEDVFGNRIIVSFTPKNRELCETKSSNAIADKVKSPKKLKNPKLCLIKDASEQSSSAKATPGKG
SQANSGSATKNTNVKSLQELCRMESKTGHRNSEHQQGHLRLVVPTHGNSSAAVSTPKNSGVAEPVYKTSQ
KKENLSARSVTSSPVEKKDKEETVFQVSYPSAFSKLVASRQVSPLLASQSWSSRSMSPNLLNRASPLAFN
IANSSSEADCPDPFANGADVQVSNIDYRLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENL
QDAIGAVNSLHRYKIGSKKILVSLATGAASKSLSLLSAETMSVLQDAPACCLPLFKFTDIYEKKFGHKLN
VSDLYKLTDTVAIREQGNGRLVCLLPSSQARQSPLGSSQSHDGSSTNCSPIIFEELEYHEPVCRQHCSNK
DFSEHEFDPDSYKIPFVILSLKTFAPQVHSLLQTHEGTVPLLSFPDCYIAEFGDLEVVQENQGGVPLEHF
ITCVPGVNIATAQNGIKVVKWIHNKPPPPNTDPWLLRSKSPVGNPQLIQFSREVIDLLKSQPSCVIPISH
FIPSYHHHFAKQCRVSDYGYSKLIELLEAVPHVLQILGMGSKRLLTLTHRAQVKRFTQDLLKLLKSQASK
QVIVREFSQAYHWCFSKDWDVTEYGVCELIDIVSEIPDTTICLSQQDNEMVICIPKRERTQDEIERTKQF
SKDVVDLLRHQPHFRMPFNKFIPSYHHHFGRQCKLAYYGFTKLLELFEAIPDTLQVLECGEEKILTLTEV
ERFKALAAQFVKLLRSQKDNCLMMTDLLTEYAKTFGYTFRLQDYDVSSISALTQKLCHVVKVADIESGRQ
IQLINRKSLRSLTAQLLVLLMSWEGTTHLSVEELKRHYESTHNTPLNPCEYGFMTLTELLKSLPYLVEVF
TNDKMEECVKLTSLYLFAKNVRSLLHTYHYQQIFLHEFSMAYTKYVGETLQPKTYGHSSVEELLGAIPQV
VWIKGHGHKRIVVLKNDMKSRLSSLSLSPANHENQPSEGERILEVPESHTASELKLGADGSGPSHTEQEL
LRLTDDSPVDLLCAPVPSCLPSPQLRPDPVILQSADLIQFEERPQEPSEIMILNQEEKMEIPIPGKSKTL
TSDSSSSCISAAVPVPPCPSSETSESLLSKDPVESPAKKQPKNRVKLAANFSLAPITKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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