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Report for CCDS56108.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56108.1 Public Homo sapiens 19 ZNF586 24 110 108 CCDS HistoryNCBI Gene:54807Re-query CCDS DB by CCDS ID:56108.1Re-query CCDS DB by GeneID:54807See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56108.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391702.3 ENSP00000375583.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391702.3Link to Ensembl Protein Viewer:ENSP00000375583.3Re-query CCDS DB by Nucleotide ID:ENST00000391702Re-query CCDS DB by Protein ID:ENSP00000375583
Original member Current member NCBI NM_001204814.2 NP_001191743.1 Accepted alive Link to Nucleotide Sequence:NM_001204814.2Link to Protein Sequence:NP_001191743.1Re-query CCDS DB by Nucleotide ID:NM_001204814Re-query CCDS DB by Protein ID:NP_001191743Link to BLAST:NP_001191743.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191743.1 359 Q9NXT0-3 359 100% 0 0

Chromosomal Locations for CCDS 56108.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57776636 57776669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57778751 57779796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1080 nt):
ATGCTGGAGACCTTGACACTTATATCCTCCCTGGGTTGTTGGCATGGAGGGGAAGATGAGGCAGCACCTT
CTAAGCAGAGCACGTGTATACATATATACAAAGACCAGGGAGGTCATAGTGGAGAAAGGCCTTATGAGTG
TGGGGAATATAGGAAATTATTTAAGAACAAGTCCTGCCTCACTGAACCCAGAAGAGATCACAAACACAGG
AATGTTCGCACTGGAGAAAGGCCTTATGAGTGCAGCAAATATGGGAAATTATTTCACCAAAAGCCTACAC
TCCATATTCATGAGAGATTTCATACTGGGCAAAAGACCTATGAGTGCAGTGAGTGTGGAAAATCATTTCA
CCAAAGCTCTTCACTCTTGCAGCGTCAGACACTTCACACTAGAGAAAGGCCTTATGAGTGTATTGAATGT
GGGAAAGCCTTTGCTGAAAAGTCCAGTCTCATTAACCACAGGAAAGTTCACTCTGGAGCAAAGCGTTATG
AATGCAATGAATGTGGGAAGTCCTTTGCTTATACATCTAGTCTCATTAAACACAGGAGGATTCACACTGG
AGAGAGGCCTTATGAGTGCAGTGAATGTGGGAGATCCTTTGCTGAAAACTCCAGTCTTATTAAACACTTG
AGAGTTCACACAGGAGAAAGGCCTTATGAATGCGTTGAGTGTGGAAAATCATTTCGCCGAAGCTCTTCAC
TCTTGCAGCATCAGAGAGTTCACACTAGAGAAAGGCCTTATGAATGTAGTGAATGTGGGAAATCCTTTAG
CTTAAGGTCCAACCTCATTCACCATCAGCGAGTTCATACTGGAGAAAGGCATGAGTGCGGGCAGTGTGGG
AAATCCTTTAGCCGAAAATCTAGCCTTATTATACATCTGAGAGTTCACACTGGAGAAAGGCCTTATGAGT
GCAGTGACTGTGGGAAATCCTTTGCTGAAAACTCCAGCCTTATTAAACACTTGAGAGTTCACACTGGAGA
AAGGCCATATGAATGCATTGATTGTGGAAAATCATTTCGCCACAGTTCTTCGTTCCGTCGCCATCAGAGA
GTTCATACTGGAATGAGGCCTTATAAGTGA

Translation (359 aa):
MLETLTLISSLGCWHGGEDEAAPSKQSTCIHIYKDQGGHSGERPYECGEYRKLFKNKSCLTEPRRDHKHR
NVRTGERPYECSKYGKLFHQKPTLHIHERFHTGQKTYECSECGKSFHQSSSLLQRQTLHTRERPYECIEC
GKAFAEKSSLINHRKVHSGAKRYECNECGKSFAYTSSLIKHRRIHTGERPYECSECGRSFAENSSLIKHL
RVHTGERPYECVECGKSFRRSSSLLQHQRVHTRERPYECSECGKSFSLRSNLIHHQRVHTGERHECGQCG
KSFSRKSSLIIHLRVHTGERPYECSDCGKSFAENSSLIKHLRVHTGERPYECIDCGKSFRHSSSFRRHQR
VHTGMRPYK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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