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Report for CCDS56753.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56753.1 Public Mus musculus 10 Rpl41 23 108 98 CCDS HistoryNCBI Gene:67945Re-query CCDS DB by CCDS ID:56753.1Re-query CCDS DB by GeneID:67945See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56753.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000177163.7 ENSMUSP00000134737.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000177163.7Link to Ensembl Protein Viewer:ENSMUSP00000134737.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000177163Re-query CCDS DB by Protein ID:ENSMUSP00000134737
Original member Current member EBI ENSMUST00000176683.7 ENSMUSP00000135158.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000176683.7Link to Ensembl Protein Viewer:ENSMUSP00000135158.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000176683Re-query CCDS DB by Protein ID:ENSMUSP00000135158
Original member Current member EBI ENSMUST00000176010.7 ENSMUSP00000135533.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000176010.7Link to Ensembl Protein Viewer:ENSMUSP00000135533.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000176010Re-query CCDS DB by Protein ID:ENSMUSP00000135533
Original member Current member NCBI NM_018860.4 NP_061348.1 Accepted alive Link to Nucleotide Sequence:NM_018860.4Link to Protein Sequence:NP_061348.1Re-query CCDS DB by Nucleotide ID:NM_018860Re-query CCDS DB by Protein ID:NP_061348Link to BLAST:NP_061348.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061348.1 25 P62947 25 100% 0 0

Chromosomal Locations for CCDS 56753.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 128548387 128548429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128548658 128548680 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128548949 128548960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (78 nt):
ATGAGAGCGAAGTGGCGGAAGAAGAGAATGCGCAGGCTGAAGCGCAAGAGAAGAAAGATGAGGCAGAGGT
CCAAGTAA

Translation (25 aa):
MRAKWRKKRMRRLKRKRRKMRQRSK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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