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Report for CCDS57189.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57189.1 Public Mus musculus 2 Zmynd8 23 108 98 CCDS HistoryNCBI Gene:228880Re-query CCDS DB by CCDS ID:57189.1Re-query CCDS DB by GeneID:228880See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 57189.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000177633.7 ENSMUSP00000136211.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000177633.7Link to Ensembl Protein Viewer:ENSMUSP00000136211.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000177633Re-query CCDS DB by Protein ID:ENSMUSP00000136211
Original member Current member NCBI NM_001252584.2 NP_001239513.1 Accepted alive Link to Nucleotide Sequence:NM_001252584.2Link to Protein Sequence:NP_001239513.1Re-query CCDS DB by Nucleotide ID:NM_001252584Re-query CCDS DB by Protein ID:NP_001239513Link to BLAST:NP_001239513.1

Chromosomal Locations for CCDS 57189.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 165785590 165785738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165787164 165787247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165791905 165791971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165792804 165792967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165794395 165794634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165796083 165796161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165797934 165798014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165805187 165805377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165807675 165807929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165812349 165812858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165815317 165815469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165820542 165820688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165828208 165828689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165833309 165833424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165834890 165834967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165837281 165837336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165838812 165838899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165839998 165840090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165842764 165842877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165846021 165846164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165852000 165852148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165875705 165875775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 165884608 165884621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3525 nt):
ATGCATCCACAGAGCTTGGCTGAAGAGGAAATAAAAACCGAGCAGGAGGTGGTGGAGGGAATGGATATCT
CTACTCGCTCCAAAGATCCTGTCTCTACAGAGAAAACGGCCCCGAAACGGAGGTTCCCCAGCCCTCCACA
TTCCTCCAATGGCCATTCGCCCCAAGACTCATCCACGAGCCCCATTAAAAAGAAAAAGAAACCCGGCTTA
CTCAACAGTAGCAATAAGGAACAGGACGGACGGAATGACTTCTATTGCTGGGTTTGTCACCGGGAAGGAC
AAGTCCTTTGCTGTGAGCTCTGTCCCCGGGTTTATCACGCTAAGTGTCTGAGACTGACATCGGAGCCAGA
GGGGGACTGGTTTTGTCCTGAATGTGAGAAGATTACAGTAGCAGAATGCATCGAGACGCAGAGCAAAGCC
ATGACCATGCTGACCATTGAACAACTGTCCTACCTGCTCAAGTTTGCCATTCAGAAAATGAAGCAGCCAG
GGACGGATGCATTCCAGAAGCCTGTTCCATTGGAGCAACACCCTGACTATGCAGAATATATTTTCCACCC
CATGGACCTTTGTACATTGGAAAAGAATGCAAAAAAGAAGATGTACGGCTGCACAGAAGCCTTCCTGGCC
GATGCCAAGTGGATCCTGCACAACTGCATTATTTATAATGGGGGAAATCACAAGTTGACGCAAATAGCAA
AAGTCGTCATCAAAATCTGTGAGCACGAGATGAATGAAATCGAAGTCTGTCCAGAATGTTATCTTGCAGC
TTGCCAAAAACGAGACAACTGGTTCTGTGAGCCCTGTAGCAATCCGCACCCTTTGGTCTGGGCAAAACTG
AAAGGATTTCCATTCTGGCCAGCGAAAGCTCTGAGGGACAAAGACGGGCAGGTTGACGCCCGTTTCTTTG
GACAACATGACAGAGCCTGGGTTCCAGTCAATAATTGCTACCTCATGTCTAAAGAAATCCCCTTTTCTGT
GAAAAAGACTAAAAGTATCTTCAACAGCGCCATGCAAGAGATGGAAGTTTACGTGGAGAACATACGGAGG
AAGTTTGGGGTTTTTAATTACTCCCCGTTCAGGACGCCCTACACGCCCAACAACCAGTACCAAATGCTGC
TGGATCCCAGCAACCCCAGCGCGGGCACAGCCAAGACAGACAAACAGGAGAAGGTGAAGCTTAATTTTGA
CATGACAGCGTCCCCCAAGATCCTTCTGAGCAAGCCCCTTCTGAGCGGGGGTGCCGGCCGCAGGATCTCC
CTGTCCGACATGCCTCGCTCCCCCACCAGTACGAACTCTTCCGTGCACACGGGCTCCGATGTGGAGCAGG
ACCCCGAGAAGAAGGCCCCGTCCAGCCACTTCAGCGCAAGCGAGGAGTCCATGGACTTCCTTGATAAGAG
CACAGCTTCTCCAGCCTCCACCAAGACGGGGCAAGCCGGGAGCTTGTCTGGCAGCCCAAAGCCTTTCTCT
CCGCAAGCGCCGACACCCATCATGACAAAACCCGACAAGACTTCCACCTCCACCACCGGGAGCATCCTGA
ACCTGAACTTGGATCGAAGCAAGGCCGAGATGGACCTGAAGGAGCTGAGCGAGTCGGTCCAGCAGCAGTC
AGCCCCCGTCCCTCTCATCTCTCCCAAGCGGCAGATTCGAAGCCGGTTCCAGCTCAACCTGGACAAGACC
ATAGAGAGTTGCAAAGCACAGCTAGGCATAAATGAGATCTCAGAGGATGTTTATACAGCCGTGGAGCACA
GCGATTCCGAGGACTCCGAAAAGTCGGAGAGCAGCGACAGCGAGTACGTCAGCGATGAGGAACAGAAGCC
CAAGAATGAGCCCGAGGACCCCGAGGACAAAGAGGGGAGTCGGGTGGACAAAGAGGCCCCTGCCATCAAA
AGGAAGCCCAAACCCACAAACCAGGTAGAGGTCAAAGAGGAAGCGAAGAGCAACTCTCCTGTCAGCGAGA
AGCCGGACCCCACACCCGCCAAGGACAAGGCCAGCCCAGAGCCTGAGAAGGACTTTGTAGAGAAAGCAAA
GCCATCACCTCATCCCACAAAGGACAAACTGAAAGGAAAGGATGAAACGGATTCTCCCACAGTGCACTTG
GGCTTGGATTCGGACTCGGAGAGCGAACTTGTCATAGACTTAGGAGAGGATCCTTCTGGGAGGGAGGGTC
GAAAAAACAAGAAAGATCCCAAGGTGCCGTCGCCTAAGCAAGACGCTATAGGTAAACCGCCACCGTCGTC
CACTTCGGCGGGCAACCAGTCTCCCCCAGAGACACCGGTACTCACCCGCTCAGCCACCCAAGCACCCGCG
GCTGGGGTCACCGTGGCCGCCGCCACCACCAGCACGATGTCTACCGTCACAGTCACGGCACCGGCCACCG
CCGTCACGGGAAGCCCGGTGAAGAAGCAGAGGCCGCTCTTACCGAAGGAGACTGTCCCAGCTGTGCAGCG
GGTCGTGTGGAACGCATCAACTGTCCAGCAGAAGGAGGTCACCCAGAGCCCATCCACGTCCACCATCACG
CTGGTGACCAGCACACAGCCGGCAGCCCTGGTCAGCAGTTCGGGCTCAGCAAGCACCCTGGCGTCTGCAA
TCAATGCCGACCTTCCCATTGCCACCGCCTCGGCCGACGTGGCCGCAGACATTGCCAAGTACACCAGCAA
AATGATGGATGCCATAAAGGGGACGATGACAGAAATCTACAATGACCTCTCCAAGAACACCACTGGGAGC
ACAATAGCTGAGATTCGAAGGCTGAGGATTGAGATTGAGAAACTGCAGTGGCTGCACCAGCAGGAGCTCG
CTGAGATGAAGCACAACCTGGAGTTGACCATGGCCGAGATGCGGCAGAGCCTGGAACAGGAGCGGGATCG
GCTCATTGCCGAGGTGAAAAAGCAACTGGAGCTGGAGAAGCAGCAGGCGGTGGACGAGACCAAGAAGAAG
CAGTGGTGTGCCAACTGCAAGAAGGAGGCCATTTTCTACTGCTGCTGGAACACCAGCTACTGTGACTACC
CCTGTCAGCAGGCCCACTGGCCCGAGCACATGAAGTCCTGTACCCAGTCGGCGACTGCCCCTCAGCAGGA
AGCAGATGCCGAGGCAAGCACAGAAACAGGAAATAAGTCATCGCAGGGCAACTCCTCCAACACACAGTCA
GCACCTTCAGAACCGGCCAGCGCCCCCAAAGAGAAAGAGGCGCCAGCGGAGAAGAGCAAGGACAGTAGTA
ACTCGACCCTGGATCTTTCCGGCTCCAGAGAGACGCCCTCCTCTATGCTCTTAGGCTCCAATCAAAGCTC
TGTTAGCAAGAGGTGTGACAAGCAGCCTGCCTATACCCCAACCACTACAGACCACCAGCCGCACCCCAAC
TACCCAGCCCAGAAGTACCATTCCCGGAGCAGCAAGGCAGGTTTGTGGAGCAGCAGCGAGGAGAAGCGAG
CGTCATCCCGCTCTGAGCACAGTGGAGGGACCAGCACGAAGAACCTCATGCCCAAAGAGTCCCGGGAGTC
TCGGCTAGATGCCTTCTGGGACTAG

Translation (1174 aa):
MHPQSLAEEEIKTEQEVVEGMDISTRSKDPVSTEKTAPKRRFPSPPHSSNGHSPQDSSTSPIKKKKKPGL
LNSSNKEQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKITVAECIETQSKA
MTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPDYAEYIFHPMDLCTLEKNAKKKMYGCTEAFLA
DAKWILHNCIIYNGGNHKLTQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAKL
KGFPFWPAKALRDKDGQVDARFFGQHDRAWVPVNNCYLMSKEIPFSVKKTKSIFNSAMQEMEVYVENIRR
KFGVFNYSPFRTPYTPNNQYQMLLDPSNPSAGTAKTDKQEKVKLNFDMTASPKILLSKPLLSGGAGRRIS
LSDMPRSPTSTNSSVHTGSDVEQDPEKKAPSSHFSASEESMDFLDKSTASPASTKTGQAGSLSGSPKPFS
PQAPTPIMTKPDKTSTSTTGSILNLNLDRSKAEMDLKELSESVQQQSAPVPLISPKRQIRSRFQLNLDKT
IESCKAQLGINEISEDVYTAVEHSDSEDSEKSESSDSEYVSDEEQKPKNEPEDPEDKEGSRVDKEAPAIK
RKPKPTNQVEVKEEAKSNSPVSEKPDPTPAKDKASPEPEKDFVEKAKPSPHPTKDKLKGKDETDSPTVHL
GLDSDSESELVIDLGEDPSGREGRKNKKDPKVPSPKQDAIGKPPPSSTSAGNQSPPETPVLTRSATQAPA
AGVTVAAATTSTMSTVTVTAPATAVTGSPVKKQRPLLPKETVPAVQRVVWNASTVQQKEVTQSPSTSTIT
LVTSTQPAALVSSSGSASTLASAINADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYNDLSKNTTGS
TIAEIRRLRIEIEKLQWLHQQELAEMKHNLELTMAEMRQSLEQERDRLIAEVKKQLELEKQQAVDETKKK
QWCANCKKEAIFYCCWNTSYCDYPCQQAHWPEHMKSCTQSATAPQQEADAEASTETGNKSSQGNSSNTQS
APSEPASAPKEKEAPAEKSKDSSNSTLDLSGSRETPSSMLLGSNQSSVSKRCDKQPAYTPTTTDHQPHPN
YPAQKYHSRSSKAGLWSSSEEKRASSRSEHSGGTSTKNLMPKESRESRLDAFWD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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