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Report for CCDS57556.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57556.1 Public Mus musculus 7 Man2a2 23 108 98 CCDS HistoryNCBI Gene:140481Re-query CCDS DB by CCDS ID:57556.1Re-query CCDS DB by GeneID:140481See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57556.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098346.4 ENSMUSP00000095949.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098346.4Link to Ensembl Protein Viewer:ENSMUSP00000095949.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000098346Re-query CCDS DB by Protein ID:ENSMUSP00000095949
Original member Current member NCBI NM_172903.4 NP_766491.2 Accepted alive Link to Nucleotide Sequence:NM_172903.4Link to Protein Sequence:NP_766491.2Re-query CCDS DB by Nucleotide ID:NM_172903Re-query CCDS DB by Protein ID:NP_766491Link to BLAST:NP_766491.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766491.2 1152 Q8BRK9-1 1152 100% 0 0

Chromosomal Locations for CCDS 57556.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 80351699 80351851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80352926 80353033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80353162 80353362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80356342 80356478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80358243 80358384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80358910 80359043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80359280 80359394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80359636 80359758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80360896 80361132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80362299 80362464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80362609 80362676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80362889 80363003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80363154 80363336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80363467 80363669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80363928 80364105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80366869 80367055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80367311 80367484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80367697 80367824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80368214 80368385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80368506 80368650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80368720 80368977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 80369593 80369724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3459 nt):
ATGAAGCTGAAAAAGCAGGTGACGGTGTGTGGGGCTGCTATCTTCTGTGTGGCCGTCTTTTCTCTGTACC
TTATGCTGGACCGAGTGCAGCATGATCCTGCCAGACACCAGAATGGTGGGAACTTCCCCAGGAGCCAAAT
CTCTGTGCTACAGAACCGGATAGAACAGCTGGAACAACTGCTGGAGGAAAACCATGACATCATAAGCCGT
ATCAAGGACTCTGTACTGGAACTGACAGCCAATGCGGAGGGCCCGCCAGCCCTGCTGCCCTACCATACCG
CCAACGGTTCCTGGGCTGTGCTCCCGGAGCCCCGGCCCAGCTTCTTCTCCGTCTCCCCCCAGGACTGCCA
GTTTGCTTTGGGGGGACGGGGTCAGAAGCCAGAACTACAGATGTTAACCGTGTCTGAGGATTTGCCGTTT
GACAATGTGGAGGGTGGCGTGTGGAGGCAAGGCTTTGACATCTCCTACAGCCCAAATGACTGGGACACTG
AAGACCTGCAAGTGTTTGTGGTGCCTCACTCCCACAACGATCCAGGCTGGATCAAGACTTTTGACAAGTA
CTACACGGAACAGACCCAGCACATCCTCAACAGCATGGTGTCCAAGCTGCAGGAAGACCCCCGGCGGCGC
TTTCTCTGGGCAGAAGTCTCCTTCTTCGCCAAGTGGTGGGACAACATCAGTGCCCAAAAGAGGGCAGCAG
TTCGAAGGCTGGTGGGAAATGGGCAGCTGGAGATTGCGACAGGCGGATGGGTGATGCCCGACGAGGCCAA
CTCCCATTACTTTGCCTTGGTTGACCAGCTCATCGAGGGGCACCAGTGGCTGGAGAGAAACCTGGGTGCA
ACCCCGCGCTCGGGCTGGGCAGTGGACCCCTTTGGACACAGCTCCACCATGCCTTACCTGCTGCGCCGTG
CCAACCTGACCAGCATGCTGATTCAGAGGGTGCATTATGCCATCAAGAAGCACTTTGCTGCCACTCATAG
CCTGGAGTTCATGTGGAGGCAGATGTGGGATTCAGACTCCAGCACAGACATCTTTTGCCACATGATGCCC
TTCTACAGCTACGACGTTCCACACACCTGTGGCCCCGATCCCAAGATCTGCTGCCAGTTTGATTTCAAAC
GTCTGCCGGGTGGGAGAATCAATTGCCCTTGGAAGGTGCCACCCCGGGCTATTACAGAAGCCAATGTGGC
AGACAGGGCAGCCCTGCTCCTGGACCAGTACCGGAAGAAGTCCCGGCTGTTCCGAAGCAACGTCCTCCTC
GTGCCACTTGGTGATGACTTCCGGTATGACAAGCCCCAGGAATGGGATGCCCAGTTCTTCAACTACCAGC
GGCTCTTTGACTTCCTCAACAGCAAGCCTGAGTTCCATGTGCAGGCCCAGTTTGGGACCCTCTCTGAGTA
TTTCGATGCCCTGTATAAGAGGACAGGAGTAGAGCCTGGTGCCCGGCCTCCAGGGTTTCCTGTGCTGAGT
GGGGACTTCTTCTCCTACGCTGACCGGGAGGACCACTACTGGACAGGCTATTACACCTCCCGGCCTTTCT
ACAAGAGCTTGGACCGCGTCCTAGAAGCCCACCTGCGTGGGGCAGAGATTCTATACAGCCTGGCTTTGGC
CCATGCCCGCCGTTCTGGACTGGCCGGCCAGTACCCGCTGTCTGATTTTGCTCTTCTGACGGAAGCTCGG
CGTACACTGGGCCTCTTCCAGCACCACGATGCCATCACGGGAACCGCCAAGGAGGCAGTAGTGGTAGACT
ACGGGGTCAGGTTGCTGCGTTCCCTGGTCAGCCTCAAGCAGGTTATCATCAATGCTGCCCACTACCTGGT
GCTGGGGGACCAGGAGACCTACAGCTTTGACCCTGGGACACCCTTCCTCCAAATGGATGACAGCCGTGTA
AGCCATGATGCCCTGCCCGAGCGCACGGTGATCCGGCTGGACTCCTCACCCAGGTTTGTGGTGGTATTTA
ACCCGCTGGAACAGGAGCGGCTCAGTGTGGTGTCCCTGCTGGTCAACTCGCCCCGGGTGCGCGTCCTTTC
AGAGGAGGGCCAGCCCCTGTCTGTGCAGATCAGTGTGCACTGGAGCTCGGCTACGGACATGGTCCCTGAT
GTCTACCAGGTGTCAGTACCCGTCCGCCTGCCAGGCCTGGGCCTGGGTGTGCTGCAGCTGCAGCCAGATC
TCGATGGGCCCTACACGCTGCAGTCTTCCGTGCGGGTCTACCTGAACGGCGTGAAACTGTCCGTCAGCAG
GCAGTCAGCATTCCCTGTCCGTGTTGTGGACTCCGGCGCCAGCGACTTCGCCATCAGCAATCGCTACATG
CAGGTCTGGTTCTCCGGCCTTACTGGGCTTCTCAAGAGCATCCGACGGGTGGATGAGGAGCAGGAGCAGC
AGATGGAACTGGAGTTCCTCGTCTACGGCACCCGTACCTCCAAGGACAAGAGTGGCGCCTACCTCTTCCT
GCCTGATAGCGAGGCTAAGCCCTACGTCCCTAAGAAACCTCCTGTGCTGCGTGTCACCGAAGGCCCTTTC
TTCTCAGAGGTGGCTGTGTACTATGAGCACTTTCACCAAGTGATTCGACTTTATAACCTGCCAGGGGTAG
AGGGGCTGTCTCTGGACATGTCATTCCAGGTAGATATCAGGGACTATGTGAACAAGGAACTGGCCCTGCG
CATCCACACAGACATTGACAGCCAGGGCACTTTCTTCACAGACCTCAATGGCTTTCAGATACAGCCCCGG
CAGTATCTGAAGAAGCTGCCCCTGCAGGCTAATTTCTACCCTATGCCAGTCATGGCCTATATCCAAGATT
CCCAGAGGCGCCTCACGCTGCACACTGCCCAGGCTCTGGGTGTCTCCAGCCTCGGTAATGGCCAGCTGGA
GGTGATCTTGGACCGAAGGCTAATGCAGGATGACAACCGGGGACTAGGCCAAGGGCTCAAAGACAACAAG
ATCACCTGCAACCGTTTCCGCCTCCTGTTAGAACGTCGGACCACAATGAGCCCAGAGGTGCATCAGGAGC
AGGAGCGTTCTACAAGCTACCCGTCCCTCCTCAGCCACCTGACATCCATGTACCTCAGCACACCTCCTCT
TGTCTTACCCGTGGCCAAGAGGCAGGGCACTAGCCCTGCTCTGCGCTCTTTCCACCCTCTGGCTTCTCCA
TTGCCCTGTGACTTCCATTTGCTCAATCTGCGCATGCTCCCAGCCGAGGACACCTTGCCCGCAACTGACT
CTGCGCTCATCTTACACCGCAAGGGGTTTGACTGTGGCCTTGAAGCCAAGAACCTGGGCTTCAACTGTAC
CACAAGCCAAGGCAAGCTAGCCCTGGGGAGCCTCTTCCATGGCCTGGATGTGACCTTCCTGCAGCCAACC
TCCTTGACTTTGCTATACCCTCTGGCCTCACCTTCCAACAGCACTGACATCTCTCTGGAGCCCATGGAGA
TCAGCACCTTCCGCCTGCGCTTGGGCTAG

Translation (1152 aa):
MKLKKQVTVCGAAIFCVAVFSLYLMLDRVQHDPARHQNGGNFPRSQISVLQNRIEQLEQLLEENHDIISR
IKDSVLELTANAEGPPALLPYHTANGSWAVLPEPRPSFFSVSPQDCQFALGGRGQKPELQMLTVSEDLPF
DNVEGGVWRQGFDISYSPNDWDTEDLQVFVVPHSHNDPGWIKTFDKYYTEQTQHILNSMVSKLQEDPRRR
FLWAEVSFFAKWWDNISAQKRAAVRRLVGNGQLEIATGGWVMPDEANSHYFALVDQLIEGHQWLERNLGA
TPRSGWAVDPFGHSSTMPYLLRRANLTSMLIQRVHYAIKKHFAATHSLEFMWRQMWDSDSSTDIFCHMMP
FYSYDVPHTCGPDPKICCQFDFKRLPGGRINCPWKVPPRAITEANVADRAALLLDQYRKKSRLFRSNVLL
VPLGDDFRYDKPQEWDAQFFNYQRLFDFLNSKPEFHVQAQFGTLSEYFDALYKRTGVEPGARPPGFPVLS
GDFFSYADREDHYWTGYYTSRPFYKSLDRVLEAHLRGAEILYSLALAHARRSGLAGQYPLSDFALLTEAR
RTLGLFQHHDAITGTAKEAVVVDYGVRLLRSLVSLKQVIINAAHYLVLGDQETYSFDPGTPFLQMDDSRV
SHDALPERTVIRLDSSPRFVVVFNPLEQERLSVVSLLVNSPRVRVLSEEGQPLSVQISVHWSSATDMVPD
VYQVSVPVRLPGLGLGVLQLQPDLDGPYTLQSSVRVYLNGVKLSVSRQSAFPVRVVDSGASDFAISNRYM
QVWFSGLTGLLKSIRRVDEEQEQQMELEFLVYGTRTSKDKSGAYLFLPDSEAKPYVPKKPPVLRVTEGPF
FSEVAVYYEHFHQVIRLYNLPGVEGLSLDMSFQVDIRDYVNKELALRIHTDIDSQGTFFTDLNGFQIQPR
QYLKKLPLQANFYPMPVMAYIQDSQRRLTLHTAQALGVSSLGNGQLEVILDRRLMQDDNRGLGQGLKDNK
ITCNRFRLLLERRTTMSPEVHQEQERSTSYPSLLSHLTSMYLSTPPLVLPVAKRQGTSPALRSFHPLASP
LPCDFHLLNLRMLPAEDTLPATDSALILHRKGFDCGLEAKNLGFNCTTSQGKLALGSLFHGLDVTFLQPT
SLTLLYPLASPSNSTDISLEPMEISTFRLRLG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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