NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS58088.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58088.1 Public Homo sapiens 10 DYDC2 24 110 108 CCDS HistoryNCBI Gene:84332Re-query CCDS DB by CCDS ID:58088.1Re-query CCDS DB by GeneID:84332See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58088.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372198.5 ENSP00000361272.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372198.5Link to Ensembl Protein Viewer:ENSP00000361272.1Re-query CCDS DB by Nucleotide ID:ENST00000372198Re-query CCDS DB by Protein ID:ENSP00000361272
Original member Current member NCBI NM_001270042.2 NP_001256971.1 Accepted alive Link to Nucleotide Sequence:NM_001270042.2Link to Protein Sequence:NP_001256971.1Re-query CCDS DB by Nucleotide ID:NM_001270042Re-query CCDS DB by Protein ID:NP_001256971Link to BLAST:NP_001256971.1

Chromosomal Locations for CCDS 58088.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80344783 80344815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80362435 80362590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80362951 80363073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80366688 80366951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (576 nt):
ATGATTCTGAGACCTCCCCAGCAATGTGGAACTGCTGCCAGGATGGAAACTAACTACCTGAAGAGGTGCT
TTGGAAATTGCCTGGCCCAGGCACTGGCAGAGGTGGCGAAGGTTCGGCCCAGTGACCCAATAGAATACCT
GGCTCACTGGCTTTATCATTACAGGAAAACAGCAAAAGCAAAAGAAGAGAATAGGGAAAAGAAGATCCAC
CTGCAGGAGGAATATGACAGTAGCCTCAAGGAAATGGAAATGACAGAAATGCTGAAACAGGAAGAGTATC
AGATTCAACAGAACTGTGAAAAGTGTCACAAGGAACTGACTTCTGAAACTGTTTCCACGAAGAAGACCAT
ATTCATGCAGGAGGACACAAACCCCCTTGAGAAGGAGGCCTTGAAGCAGGAATTCCTGCCAGGTACTTCC
AGTCTGATTCCAGGAATGCCTCAACAGGTTCCTCCTTCAGAGTCTGCTGGCCAGATTGACCAGAACTTCA
AAATGCCACAAGAAATAAATTACAAGGAGGCTTTTCAGCATGAAGTTGCTCATGAAATGCCTCCTGGCTC
CAAATCTCCTTTTTAG

Translation (191 aa):
MILRPPQQCGTAARMETNYLKRCFGNCLAQALAEVAKVRPSDPIEYLAHWLYHYRKTAKAKEENREKKIH
LQEEYDSSLKEMEMTEMLKQEEYQIQQNCEKCHKELTSETVSTKKTIFMQEDTNPLEKEALKQEFLPGTS
SLIPGMPQQVPPSESAGQIDQNFKMPQEINYKEAFQHEVAHEMPPGSKSPF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH