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Report for CCDS58385.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58385.1 Public Homo sapiens 15 STOML1 24 110 108 CCDS HistoryNCBI Gene:9399Re-query CCDS DB by CCDS ID:58385.1Re-query CCDS DB by GeneID:9399See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58385.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359750.8 ENSP00000352788.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359750.8Link to Ensembl Protein Viewer:ENSP00000352788.4Re-query CCDS DB by Nucleotide ID:ENST00000359750Re-query CCDS DB by Protein ID:ENSP00000352788
Original member Current member NCBI NM_001256675.2 NP_001243604.1 Accepted alive Link to Nucleotide Sequence:NM_001256675.2Link to Protein Sequence:NP_001243604.1Re-query CCDS DB by Nucleotide ID:NM_001256675Re-query CCDS DB by Protein ID:NP_001243604Link to BLAST:NP_001243604.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243604.1 327 Q9UBI4-6 327 100% 0 0

Chromosomal Locations for CCDS 58385.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 73983937 73984130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73985318 73985513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73988599 73988802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73989108 73989257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73990351 73990457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73992091 73992223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (984 nt):
ATGCTCGGCAGGTCTGGGTACCGGGCGCTGCCCCTGGGTGATTTTGACCGCTTCCAGCAGTCGAGCTTCG
GCTTTCTGGGCTCGCAGAAGGGCTGCTTGTCCCCGGAGCGGGGCGGCGTGGGGACAGGGGCCGATGTACC
CCAGAGCTGGCCCTCCTGCCTCTGTCATGGCCTCATCAGTTTCCTGGGGTTCTTGCTGCTGTTGGTCACC
TTCCCCATTTCTGGCTGGTTTGCCCTGAAGATTGTGCCCACCTACGAGCGGATGATTGTGTTCCGCCTGG
GCCGGATCCGCACCCCCCAGGGACCTGGCATGGTTCTGCTCTTGCCCTTCATTGACTCCTTTCAGAGGGT
GGATCTGAGGACACGAGCCTTCAACGTCCCTCCCTGCAAGCTGGCCTCTAAGGACGGGGCTGTGCTGTCC
GTGGGAGCCGATGTCCAGTTTCGCATCTGGGACCCGGTGCTGTCGGTGATGACTGTGAAAGACCTGAACA
CAGCCACACGCATGACAGCCCAGAACGCCATGACCAAGGCCCTGCTCAAGAGGCCGCTGCGGGAGATCCA
GATGGAGAAGCTCAAGATCAGCGACCAGCTTCTGCTGGAGATCAACGATGTGACCAGGGCCTGGGGGCTG
GAGGTAGACCGCGTGGAGCTGGCAGTGGAGGCCGTGCTCCAGCCGCCCCAGGACAGCCCAGCTGGGCCCA
ACCTGGACAGCACCCTCCAGCAGCTGGCCCTGCACTTCCTGGGAGGAAGCATGAACTCAATGGCAGGAGG
TGCCCCGTCCCCGGGGCCAGGACGAGGAAGAGTGGGACACGGGGTGCCTGATGGCATCCCTGATGTGGTG
GTGGAGATGGCCGAGGCAGACCTGCGGGCCCTGCTATGCAGAGAGCTGCGGCCCCTGGGGGCCTACATGA
GTGGACGGCTGAAGGTGAAGGGCGACCTGGCTATGGCCATGAAGCTGGAGGCTGTCCTCAGGGCCTTGAA
GTAG

Translation (327 aa):
MLGRSGYRALPLGDFDRFQQSSFGFLGSQKGCLSPERGGVGTGADVPQSWPSCLCHGLISFLGFLLLLVT
FPISGWFALKIVPTYERMIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASKDGAVLS
VGADVQFRIWDPVLSVMTVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKISDQLLLEINDVTRAWGL
EVDRVELAVEAVLQPPQDSPAGPNLDSTLQQLALHFLGGSMNSMAGGAPSPGPGRGRVGHGVPDGIPDVV
VEMAEADLRALLCRELRPLGAYMSGRLKVKGDLAMAMKLEAVLRALK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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