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Report for CCDS58419.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58419.1 Public Homo sapiens 16 CDIP1 24 110 108 CCDS HistoryNCBI Gene:29965Re-query CCDS DB by CCDS ID:58419.1Re-query CCDS DB by GeneID:29965See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58419.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000563507.5 ENSP00000455462.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000563507.5Link to Ensembl Protein Viewer:ENSP00000455462.1Re-query CCDS DB by Nucleotide ID:ENST00000563507Re-query CCDS DB by Protein ID:ENSP00000455462
Original member Current member NCBI NM_001199055.2 NP_001185984.1 Accepted alive Link to Nucleotide Sequence:NM_001199055.2Link to Protein Sequence:NP_001185984.1Re-query CCDS DB by Nucleotide ID:NM_001199055Re-query CCDS DB by Protein ID:NP_001185984Link to BLAST:NP_001185984.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001185984.1 169 Q9H305-2 169 100% 0 0

Chromosomal Locations for CCDS 58419.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 4512572 4512683 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4512791 4512947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4513696 4513851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 4514046 4514130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (510 nt):
ATGTCCAGCGAGCCTCCCCCTCCTTATCCTGGGGGCCCCACAGCCCCACTTCTGGAAGAGAAAAGTGGAG
CCCCGCCCACCCCAGGCCGTTCCTCCCCAGCTGTGATGCAGCCCCCTCCAGGCATGCCACTGCCCCCTGC
GGACATTGGCCCCCCACCCTATGAGCCGCCGGGTCACCCAATGCCCCAGCCTGGCTTCATCCCACCACAC
ATGAGTGCAGATGGCACCTACATGCCTCCGGGAGCTGCCACCACGGTGACAGTGCTGCAGGGAGAGATCT
TTGAGGGAGCGCCTGTGCAGACGGTGTGTCCCCACTGCCAGCAGGCCATCACCACCAAGATCTCCTACGA
GATTGGCTTGATGAATTTCGTGCTGGGTTTCTTCTGTTGCTTCATGGGATGTGATCTGGGCTGCTGCCTG
ATCCCCTGCCTCATCAATGACTTCAAGGATGTGACGCACACATGCCCCAGCTGCAAAGCCTACATCTACA
CGTACAAGCGCCTGTGCTAA

Translation (169 aa):
MSSEPPPPYPGGPTAPLLEEKSGAPPTPGRSSPAVMQPPPGMPLPPADIGPPPYEPPGHPMPQPGFIPPH
MSADGTYMPPGAATTVTVLQGEIFEGAPVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCL
IPCLINDFKDVTHTCPSCKAYIYTYKRLC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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