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Report for CCDS59135.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59135.1 Public Homo sapiens 9 NOL8 24 110 108 CCDS HistoryNCBI Gene:55035Re-query CCDS DB by CCDS ID:59135.1Re-query CCDS DB by GeneID:55035See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59135.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358855.8 ENSP00000351723.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000358855.8Link to Ensembl Protein Viewer:ENSP00000351723.4Re-query CCDS DB by Nucleotide ID:ENST00000358855Re-query CCDS DB by Protein ID:ENSP00000351723
Original member Current member EBI ENST00000542053.5 ENSP00000440709.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000542053.5Link to Ensembl Protein Viewer:ENSP00000440709.1Re-query CCDS DB by Nucleotide ID:ENST00000542053Re-query CCDS DB by Protein ID:ENSP00000440709
Original member Current member NCBI NM_001256394.2 NP_001243323.1 Accepted alive Link to Nucleotide Sequence:NM_001256394.2Link to Protein Sequence:NP_001243323.1Re-query CCDS DB by Nucleotide ID:NM_001256394Re-query CCDS DB by Protein ID:NP_001243323Link to BLAST:NP_001243323.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243323.1 1099 Q76FK4-2 1099 100% 0 0

Chromosomal Locations for CCDS 59135.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 92297836 92297886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92298257 92298336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92298884 92298954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92299890 92300016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92301551 92301822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92305753 92305830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92306886 92307024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92310171 92310261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92310553 92310675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92311146 92311259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92314267 92316138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92318618 92318686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92319221 92319356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 92321668 92321744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3300 nt):
ATGTCTGTTTTAAATAAAACAAAATGGAAAGGTGGAACATTACAAATTCAACTAGCAAAAGAAAGCTTTC
TGCACAGATTGGCCCAAGAGAGAGAAGCAGCAAAAGCTAAGAAAGAAGAATCAACAACAGGTAACGCCAA
CTTGTTAGAAAAGACAGGAGGAGTGGATTTCCATATGAAAGCTGTGCCAGGGACAGAAGTGCCAGGGCAT
AAGAATTGGGTTGTGAGCAAATTTGGAAGAGTCTTACCTGTTCTTCACCTTAAAAATCAACATAAACGTA
AAATCATCAAATATGATCCCTCAAAATACTGCCACAACCTGAAGAAGATAGGGGAGGATTTCTCAAACAC
CATTCCTATATCCAGCCTGACTTGGGAATTAGAAGGAGGGAATGACCCTATGAGTAAGAAACGGCGAGGA
GAGTTCTCTGACTTTCATGGCCCTCCCAAGAAGATAATAAAAGTGCAGAAGGATGAGAGTTCCACTGGGT
CTCTGGCCATGAGTACAAGGCCCAGGAGGGTAATAGAGAGACCACCCTTAACACAGCAACAGGCTGCACA
AAAAAGAACTTGTGATTCCATTACTCCTTCTAAATCATCTCCTGTACCTGTTTCTGATACTCAGAAACTT
AAAAATCTACCTTTTAAGACTTCTGGCTTGGAAACTGCCAAGAAGAGAAACAGCATTTCTGATGATGATA
CTGATTCTGAAGATGAATTGAGAATGATGATTGCGAAAGAGGAAAACTTACAGAGAACTACACAACCCTC
AATAAATGAATCTGAAAGTGATCCTTTTGAAGTTGTAAGGGATGATTTCAAATCAGGCGTTCACAAACTG
CATTCTTTAATAGGTTTAGGTATCAAAAATCGTGTCTCTTGCCATGATAGTGATGATGATATTATGAGAA
ATGATCGTGAGTATGACTCAGGAGATACAGATGAAATTATTGCGATGAAAAAAAATGTTGCTAAGGTCAA
AAACAGTACAGAATTTTCACAAATGGAAAAATCTACGAAGAAAACTTCTTTCAAAAATAGAGAAAACTGT
GAGCTTTCTGATCACTGTATTAAACTACAAAAAAGAAAAAGCAATGTAGAGTCAGCCCTCAGTCATGGAT
TAAAGTCTCTTAATCGTAAATCTCCCTCTCACTCCAGTAGCAGTGAAGATGCTGATTCTGCATCAGAATT
AGCTGACTCTGAAGGAGGTGAGGAGTATAATGCCATGATGAAAAACTGCCTTCGTGTGAATCTCACTTTA
GCTGATTTGGAACAATTGGCTGGCAGTGATCTGAAGGTTCCAAATGAAGATACTAAGAGTGATGGACCAG
AAACCACCACCCAATGCAAGTTTGACAGAGGCTCCAAGAGCCCCAAGACTCCCACTGGCCTCCGCAGAGG
CCGACAGTGTATTCGTCCTGCGGAGATTGTGGCTTCCCTGTTAGAAGGAGAGGAGAACACCTGTGGCAAA
CAGAAACCAAAGGAAAACAATTTAAAGCCAAAATTTCAGGCTTTCAAGGGAGTAGGCTGTCTATATGAAA
AGGAGTCAATGAAAAAATCCTTGAAAGACAGTGTTGCCTCTAACAATAAAGATCAGAATTCCATGAAACA
TGAGGATCCCAGTATCATATCCATGGAAGATGGGTCCCCATATGTTAATGGCTCATTAGGTGAAGTGACT
CCATGCCAACATGCAAAGAAGGCGAATGGCCCAAACTATATTCAGCCTCAAAAAAGACAGACCACTTTTG
AAAGCCAGGATCGCAAGGCAGTGTCCCCTAGCAGTTCTGAAAAGAGAAGTAAGAATCCTATTTCTAGGCC
ATTAGAAGGTAAGAAGTCCTTAAGTCTTAGTGCAAAGACTCACAACATAGGCTTTGACAAAGACAGCTGC
CATAGTACCACAAAGACAGAAGCTTCACAGGAAGAGCGGTCTGATTCAAGCGGCCTCACATCTCTCAAGA
AATCACCAAAGGTCTCATCCAAGGACACTCGGGAAATCAAAACTGATTTCTCACTTTCTATTAGTAATTC
GTCAGATGTGAGTGCTAAAGATAAGCATGCTGAAGACAATGAGAAGCGTTTGGCAGCCTTGGAAGCGAGG
CAAAAAGCAAAAGAAGTGCAGAAGAAGCTGGTGCATAATGCTCTGGCAAATTTGGATGGTCATCCAGAGG
ATAAGCCAACGCACATCATCTTCGGTTCTGACAGTGAATGTGAAACAGAGGAGACATCGACTCAGGAGCA
GAGCCATCCAGGAGAGGAATGGGTGAAAGAGTCTATGGGTAAAACATCAGGGAAGCTGTTTGATAGCAGT
GATGATGACGAATCTGATTCTGAAGATGACAGTAATAGGTTCAAAATTAAACCTCAGTTTGAGGGCAGAG
CTGGACAGAAGCTCATGGATTTACAGTCGCACTTTGGCACCGATGACAGATTCCGCATGGACTCTCGATT
TCTAGAAACTGACAGTGAAGAGGAACAGGAAGAGGTAAATGAAAAGAAAACTGCTGAGGAAGAAGAGCTT
GCTGAAGAAAAAAAGAAAGCCCTGAATGTTGTACAAAGTGTTTTGCAAATCAACTTAAGCAATTCTACAA
ACAGAGGATCAGTAGCTGCTAAGAAATTTAAGGACATCATACATTATGATCCAACGAAGCAAGACCATGC
CACTTACGAAAGAAAAAGAGATGATAAGCCAAAAGAAAGTAAAGCAAAACGAAAAAAGAAAAGGGAGGAA
GCTGAGAAACTACCTGAGGTGTCTAAAGAAATGTATTATAATATTGCTATGGATCTGAAAGAAATATTCC
AAACTACAAAATATACCAGTGAAAAGGAAGAGGGCACACCCTGGAATGAGGACTGTGGTAAAGAGAAACC
TGAGGAAATCCAGGACCCTGCAGCTCTGACCAGTGACGCTGAGCAGCCCAGCGGGTTCACGTTCTCTTTT
TTTGATTCAGACACTAAAGACATAAAGGAAGAGACCTACAGAGTTGAAACAGTGAAACCTGGAAAGATTG
TCTGGCAGGAAGACCCTCGTTTACAAGACAGCAGTTCAGAAGAGGAAGATGTTACTGAAGAAACAGATCA
CAGAAACTCCAGTCCTGGAGAAGCATCATTACTTGAGAAAGAGACCACTAGATTTTTCTTTTTCTCTAAG
AATGATGAACGACTTCAAGGTTCTGACTTATTCTGGAGAGGAGTAGGAAGTAATATGAGCAGGAACTCTT
GGGAGGCCAGAACAACCAACCTGCGTATGGATTGTCGAAAGAAACATAAAGACGCAAAAAGGAAAATGAA
ACCAAAATAA

Translation (1099 aa):
MSVLNKTKWKGGTLQIQLAKESFLHRLAQEREAAKAKKEESTTGNANLLEKTGGVDFHMKAVPGTEVPGH
KNWVVSKFGRVLPVLHLKNQHKRKIIKYDPSKYCHNLKKIGEDFSNTIPISSLTWELEGGNDPMSKKRRG
EFSDFHGPPKKIIKVQKDESSTGSLAMSTRPRRVIERPPLTQQQAAQKRTCDSITPSKSSPVPVSDTQKL
KNLPFKTSGLETAKKRNSISDDDTDSEDELRMMIAKEENLQRTTQPSINESESDPFEVVRDDFKSGVHKL
HSLIGLGIKNRVSCHDSDDDIMRNDREYDSGDTDEIIAMKKNVAKVKNSTEFSQMEKSTKKTSFKNRENC
ELSDHCIKLQKRKSNVESALSHGLKSLNRKSPSHSSSSEDADSASELADSEGGEEYNAMMKNCLRVNLTL
ADLEQLAGSDLKVPNEDTKSDGPETTTQCKFDRGSKSPKTPTGLRRGRQCIRPAEIVASLLEGEENTCGK
QKPKENNLKPKFQAFKGVGCLYEKESMKKSLKDSVASNNKDQNSMKHEDPSIISMEDGSPYVNGSLGEVT
PCQHAKKANGPNYIQPQKRQTTFESQDRKAVSPSSSEKRSKNPISRPLEGKKSLSLSAKTHNIGFDKDSC
HSTTKTEASQEERSDSSGLTSLKKSPKVSSKDTREIKTDFSLSISNSSDVSAKDKHAEDNEKRLAALEAR
QKAKEVQKKLVHNALANLDGHPEDKPTHIIFGSDSECETEETSTQEQSHPGEEWVKESMGKTSGKLFDSS
DDDESDSEDDSNRFKIKPQFEGRAGQKLMDLQSHFGTDDRFRMDSRFLETDSEEEQEEVNEKKTAEEEEL
AEEKKKALNVVQSVLQINLSNSTNRGSVAAKKFKDIIHYDPTKQDHATYERKRDDKPKESKAKRKKKREE
AEKLPEVSKEMYYNIAMDLKEIFQTTKYTSEKEEGTPWNEDCGKEKPEEIQDPAALTSDAEQPSGFTFSF
FDSDTKDIKEETYRVETVKPGKIVWQEDPRLQDSSSEEEDVTEETDHRNSSPGEASLLEKETTRFFFFSK
NDERLQGSDLFWRGVGSNMSRNSWEARTTNLRMDCRKKHKDAKRKMKPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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