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Report for CCDS5972.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5972.1 Public Homo sapiens 8 ERI1 24 110 108 CCDS HistoryNCBI Gene:90459Re-query CCDS DB by CCDS ID:5972.1Re-query CCDS DB by GeneID:90459See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5972.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000250263.8 ENSP00000250263.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000250263.8Link to Ensembl Protein Viewer:ENSP00000250263.7Re-query CCDS DB by Nucleotide ID:ENST00000250263Re-query CCDS DB by Protein ID:ENSP00000250263
Original member Current member EBI ENST00000519292.5 ENSP00000430190.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000519292.5Link to Ensembl Protein Viewer:ENSP00000430190.1Re-query CCDS DB by Nucleotide ID:ENST00000519292Re-query CCDS DB by Protein ID:ENSP00000430190
Original member Current member NCBI NM_153332.4 NP_699163.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153332.4Link to Protein Sequence:NP_699163.2Re-query CCDS DB by Nucleotide ID:NM_153332Re-query CCDS DB by Protein ID:NP_699163Link to BLAST:NP_699163.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_699163.2 349 Q8IV48 349 100% 0 0

Chromosomal Locations for CCDS 5972.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 9003064 9003171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9007970 9008148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9011542 9011752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9016322 9016405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9018297 9018406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9020350 9020464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 9029792 9030034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1050 nt):
ATGGAGGATCCACAGAGTAAAGAGCCTGCCGGCGAGGCCGTGGCTCTCGCGCTGCTGGAGTCGCCGCGGC
CGGAGGGCGGGGAGGAGCCGCCGCGTCCCAGTCCCGAGGAAACTCAACAGTGTAAATTTGATGGCCAGGA
GACAAAAGGATCCAAGTTCATTACCTCCAGTGCGAGTGACTTCAGTGACCCGGTTTACAAAGAGATTGCC
ATTACGAATGGCTGTATTAATAGAATGAGTAAGGAAGAACTCAGAGCTAAGCTTTCAGAATTCAAGCTTG
AAACTAGAGGAGTAAAGGATGTTCTAAAGAAGAGACTGAAAAACTATTATAAGAAGCAGAAGCTGATGCT
GAAAGAGAGCAATTTTGCTGACAGTTATTATGACTACATTTGTATTATTGACTTTGAAGCCACTTGTGAA
GAAGGAAACCCACCTGAGTTTGTACATGAAATAATTGAATTTCCGGTTGTTTTACTGAATACGCATACTT
TAGAAATAGAAGACACGTTTCAGCAGTATGTAAGACCAGAGATTAACACACAGCTGTCTGATTTCTGCAT
CAGTCTAACTGGAATTACTCAGGATCAGGTAGACAGAGCTGATACCTTCCCTCAGGTACTAAAAAAAGTA
ATTGACTGGATGAAATTGAAGGAATTAGGAACAAAGTATAAATACTCACTTTTAACAGATGGTTCTTGGG
ATATGAGTAAGTTCTTGAACATTCAGTGTCAACTCAGCAGGCTCAAATACCCTCCTTTTGCGAAAAAGTG
GATCAATATTCGGAAGTCATATGGAAATTTTTACAAGGTTCCTAGAAGCCAAACCAAACTGACAATAATG
CTTGAAAAATTAGGAATGGATTATGATGGGCGGCCTCACTGTGGTCTTGATGACTCTAAGAATATCGCCC
GAATAGCAGTTCGAATGCTTCAGGATGGGTGTGAACTCCGAATCAACGAGAAAATGCATGCAGGACAGCT
AATGAGTGTGTCCTCTTCCTTACCAATAGAGGGCACTCCACCACCACAAATGCCACATTTTAGAAAGTAA

Translation (349 aa):
MEDPQSKEPAGEAVALALLESPRPEGGEEPPRPSPEETQQCKFDGQETKGSKFITSSASDFSDPVYKEIA
ITNGCINRMSKEELRAKLSEFKLETRGVKDVLKKRLKNYYKKQKLMLKESNFADSYYDYICIIDFEATCE
EGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCISLTGITQDQVDRADTFPQVLKKV
IDWMKLKELGTKYKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQTKLTIM
LEKLGMDYDGRPHCGLDDSKNIARIAVRMLQDGCELRINEKMHAGQLMSVSSSLPIEGTPPPQMPHFRK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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