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Report for CCDS60544.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
60544.1 Public Homo sapiens 10 RUFY2 24 110 108 CCDS HistoryNCBI Gene:55680Re-query CCDS DB by CCDS ID:60544.1Re-query CCDS DB by GeneID:55680See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 60544.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000454950.6 ENSP00000404986.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000454950.6Link to Ensembl Protein Viewer:ENSP00000404986.2Re-query CCDS DB by Nucleotide ID:ENST00000454950Re-query CCDS DB by Protein ID:ENSP00000404986
Original member Current member NCBI NM_001278225.2 NP_001265154.1 Accepted alive Link to Nucleotide Sequence:NM_001278225.2Link to Protein Sequence:NP_001265154.1Re-query CCDS DB by Nucleotide ID:NM_001278225Re-query CCDS DB by Protein ID:NP_001265154Link to BLAST:NP_001265154.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265154.1 379 Q8WXA3-5 379 100% 0 0

Chromosomal Locations for CCDS 60544.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 68378562 68378670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68379424 68379521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68381232 68381399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68383798 68383914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68384051 68384152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68386059 68386128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68393138 68393203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68394075 68394136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68394328 68394451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68396780 68396881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68401620 68401737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68407186 68407189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1140 nt):
ATGGTAAGAAAATCATTTTTGAGTTACAACAAAACCATCTGGGGCCCTTTGGAACTGGTGGAGAAGCTGT
ACCCCGAAGCAGAGGAAATAGGAGCTAGTGTCCGGGATCTACCTGGTCTGAAGACCCCTCTGGGTCGAGC
AAGAGCGTGGCTTCGATTAGCCCTCATGCAAAAAAAAATGGCCGATTACTTACGTTGCTTAATTATTCAG
AGGGATCTCTTGAGTGAGTTTTATGAGTATCACGCACTAATGATGGAAGAAGAAGGAGCAGTAATTGTTG
GGCTGCTGGTTGGCCTGAATGTGATCGATGCTAATCTGTGTGTGAAGGGAGAGGATTTAGACTCACAAGT
TGGAGTGATTGATTTTTCTATGTATTTAAAGAATGAAGAAGATATTGGAAATAAAGAAAGGAATGTTCAA
ATTGCTGCCATATTAGACCAAAAGAATTATGTTGAAGAATTAAATAGACAACTGAACAGCACAGTCAGCA
GCCTCCATTCAAGAGTTGATTCATTAGAAAAGTCAAATACTAAGCTGATTGAAGAGTTAGCAATAGCAAA
GAATAACATCATTAAACTCCAGGAAGAAAATCATCAATTACGAAGTGAAAATAAATTGATTTTAATGAAA
ACACAGCAGCACCTAGAGGTTACCAAAGTAGATGTGGAAACTGAGCTTCAAACATATAAGCATTCTCGTC
AGGGGCTAGATGAAATGTACAATGAAGCCAGAAGGCAGCTTCGAGATGAATCTCAGTTACGACAGGATGT
AGAGAATGAGCTAGCAGTACAAGTTAGTATGAAGCATGAGATTGAACTTGCCATGAAGTTGCTGGAGAAA
GATATCCATGAGAAACAAGATACTCTGATAGGCCTTCGACAACAACTAGAGGAAGTTAAAGCAATTAACA
TAGAGATGTATCAAAAGTTGCAGGGTTCTGAAGATGGCTTGAAAGAAAAAAATGAAATAATTGCCCGACT
AGAAGAAAAAACCAATAAAATTACTGCAGCCATGAGGCAGCTGGAACAAAGTGACAACGATTTGTTAACT
CAAACTAGGACAATTGCAATGTCATTGGTGAAATGTGCCAGCAGTGACACGCAGGACCAGTACAAGCTGG
TTAAAGATATATCTTTCTGA

Translation (379 aa):
MVRKSFLSYNKTIWGPLELVEKLYPEAEEIGASVRDLPGLKTPLGRARAWLRLALMQKKMADYLRCLIIQ
RDLLSEFYEYHALMMEEEGAVIVGLLVGLNVIDANLCVKGEDLDSQVGVIDFSMYLKNEEDIGNKERNVQ
IAAILDQKNYVEELNRQLNSTVSSLHSRVDSLEKSNTKLIEELAIAKNNIIKLQEENHQLRSENKLILMK
TQQHLEVTKVDVETELQTYKHSRQGLDEMYNEARRQLRDESQLRQDVENELAVQVSMKHEIELAMKLLEK
DIHEKQDTLIGLRQQLEEVKAINIEMYQKLQGSEDGLKEKNEIIARLEEKTNKITAAMRQLEQSDNDLLT
QTRTIAMSLVKCASSDTQDQYKLVKDISF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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