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Report for CCDS6631.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6631.1 Public Homo sapiens 9 MAMDC2 24 110 108 CCDS HistoryNCBI Gene:256691Re-query CCDS DB by CCDS ID:6631.1Re-query CCDS DB by GeneID:256691See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6631.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000377182.5 ENSP00000366387.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000377182.5Link to Ensembl Protein Viewer:ENSP00000366387.4Re-query CCDS DB by Nucleotide ID:ENST00000377182Re-query CCDS DB by Protein ID:ENSP00000366387
Original member Current member NCBI NM_153267.5 NP_694999.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153267.5Link to Protein Sequence:NP_694999.3Re-query CCDS DB by Nucleotide ID:NM_153267Re-query CCDS DB by Protein ID:NP_694999Link to BLAST:NP_694999.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694999.3 686 Q7Z304-1 686 100% 0 0

Chromosomal Locations for CCDS 6631.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 70044198 70044231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70044584 70044697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70108211 70108482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70109720 70109804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70112995 70113132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70126159 70126415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70131519 70131612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70140145 70140288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70143554 70143819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70168702 70168795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70170479 70170631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70218337 70218596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70225750 70225834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 70225968 70226032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2061 nt):
ATGCTGTTAAGGGGCGTCCTCCTGGCGTTGCAAGCCCTGCAGCTCGCCGGTGCCCTCGACCTGCCCGCTG
GGTCCTGTGCCTTTGAAGAGAGCACTTGCGGCTTTGACTCCGTGTTGGCCTCTCTGCCGTGGATTTTAAA
TGAGGAAGGCCATTACATTTATGTGGATACCTCCTTTGGCAAGCAGGGGGAGAAAGCTGTGCTGCTAAGT
CCTGACTTACAGGCTGAGGAATGGAGCTGCCTCCGTTTGGTCTACCAGATAACCACATCTTCGGAGTCTC
TGTCAGATCCCAGCCAGCTGAACCTCTACATGAGATTTGAAGATGAAAGCTTTGATCGCTTGCTTTGGTC
AGCTAAGGAACCTTCAGACAGCTGGCTCATAGCCAGCTTGGATTTGCAAAACAGTTCCAAGAAATTCAAG
ATTTTAATAGAAGGTGTACTAGGACAGGGAAACACAGCCAGCATCGCACTATTTGAAATCAAGATGACAA
CCGGCTACTGTATTGAATGTGACTTTGAAGAAAATCATCTCTGTGGCTTTGTGAACCGCTGGAATCCCAA
TGTGAACTGGTTTGTTGGAGGAGGAAGTATTCGGAATGTCCACTCCATTCTCCCACAGGATCACACCTTC
AAGAGTGAACTGGGCCACTACATGTACGTGGACTCAGTTTATGTGAAGCACTTCCAGGAGGTGGCACAGC
TCATCTCCCCGTTGACCACGGCCCCCATGGCTGGCTGCCTGTCATTTTATTACCAGATCCAGCAGGGGAA
TGACAATGTCTTTTCCCTTTACACTCGGGATGTGGCTGGCCTTTACGAGGAAATCTGGAAAGCAGACAGG
CCAGGGAATGCTGCCTGGAACCTTGCGGAGGTCGAGTTCAGTGCTCCTTACCCCATGGAGGTTATTTTTG
AAGTTGCTTTCAATGGTCCCAAGGGAGGTTATGTTGCCCTGGATGATATTTCATTCTCTCCTGTTCACTG
CCAGAATCAGACAGAACTTCTGTTCAGTGCCGTGGAAGCCAGCTGCAATTTTGAGCAAGATCTCTGCAAC
TTTTACCAAGATAAAGAAGGTCCAGGTTGGACCCGAGTGAAAGTAAAACCAAACATGTATCGGGCTGGAG
ACCACACTACAGGCTTAGGGTATTACCTGCTAGCCAACACAAAGTTCACATCTCAGCCTGGCTACATTGG
AAGGCTCTATGGGCCCTCCCTACCAGGAAACTTGCAGTATTGTCTGCGTTTTCATTATGCCATCTATGGA
TTTTTAAAAATGAGTGACACCCTAGCAGTTTACATCTTTGAAGAGAACCATGTGGTTCAAGAGAAGATCT
GGTCTGTGTTGGAGTCCCCAAGGGGTGTTTGGATGCAAGCTGAAATCACCTTTAAGAAGCCCATGCCTAC
CAAGGTGGTTTTCATGAGCCTATGCAAAAGTTTCTGGGACTGTGGGCTTGTAGCCCTGGATGACATTACA
ATACAATTGGGAAGCTGCTCATCTTCAGAGAAACTTCCACCTCCACCTGGAGAGTGTACTTTCGAGCAAG
ATGAATGTACATTTACTCAGGAGAAAAGAAACCGGAGCAGCTGGCACAGGAGGAGGGGAGAAACTCCCAC
TTCCTACACAGGACCAAAGGGAGATCACACTACTGGGGTAGGCTACTACATGTACATTGAGGCCTCCCAT
ATGGTGTATGGACAAAAAGCACGCCTCTTGTCCAGGCCTCTGCGAGGAGTCTCTGGAAAACACTGCTTGA
CCTTTTTCTACCACATGTATGGAGGGGGCACTGGCCTGCTGAGTGTTTATCTGAAAAAGGAAGAAGACAG
TGAAGAGTCCCTCTTATGGAGGAGAAGAGGTGAACAGAGCATTTCCTGGCTACGAGCACTGATTGAATAC
AGCTGTGAGAGGCAACACCAGATAATTTTTGAAGCCATTCGAGGAGTATCAATAAGAAGTGATATTGCCA
TTGATGATGTTAAATTTCAGGCAGGACCCTGTGGAGAAATGGAAGATACAACTCAACAATCATCAGGATA
TTCTGAGGACTTAAATGAAATTGAGTATTAA

Translation (686 aa):
MLLRGVLLALQALQLAGALDLPAGSCAFEESTCGFDSVLASLPWILNEEGHYIYVDTSFGKQGEKAVLLS
PDLQAEEWSCLRLVYQITTSSESLSDPSQLNLYMRFEDESFDRLLWSAKEPSDSWLIASLDLQNSSKKFK
ILIEGVLGQGNTASIALFEIKMTTGYCIECDFEENHLCGFVNRWNPNVNWFVGGGSIRNVHSILPQDHTF
KSELGHYMYVDSVYVKHFQEVAQLISPLTTAPMAGCLSFYYQIQQGNDNVFSLYTRDVAGLYEEIWKADR
PGNAAWNLAEVEFSAPYPMEVIFEVAFNGPKGGYVALDDISFSPVHCQNQTELLFSAVEASCNFEQDLCN
FYQDKEGPGWTRVKVKPNMYRAGDHTTGLGYYLLANTKFTSQPGYIGRLYGPSLPGNLQYCLRFHYAIYG
FLKMSDTLAVYIFEENHVVQEKIWSVLESPRGVWMQAEITFKKPMPTKVVFMSLCKSFWDCGLVALDDIT
IQLGSCSSSEKLPPPPGECTFEQDECTFTQEKRNRSSWHRRRGETPTSYTGPKGDHTTGVGYYMYIEASH
MVYGQKARLLSRPLRGVSGKHCLTFFYHMYGGGTGLLSVYLKKEEDSEESLLWRRRGEQSISWLRALIEY
SCERQHQIIFEAIRGVSIRSDIAIDDVKFQAGPCGEMEDTTQQSSGYSEDLNEIEY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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