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Report for CCDS66738.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
66738.1 Public Homo sapiens 15 EXD1 24 110 108 CCDS HistoryNCBI Gene:161829Re-query CCDS DB by CCDS ID:66738.1Re-query CCDS DB by GeneID:161829See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 66738.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000458580.7 ENSP00000415056.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000458580.7Link to Ensembl Protein Viewer:ENSP00000415056.2Re-query CCDS DB by Nucleotide ID:ENST00000458580Re-query CCDS DB by Protein ID:ENSP00000415056
Original member Current member NCBI NM_001286441.2 NP_001273370.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001286441.2Link to Protein Sequence:NP_001273370.1Re-query CCDS DB by Nucleotide ID:NM_001286441Re-query CCDS DB by Protein ID:NP_001273370Link to BLAST:NP_001273370.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273370.1 572 Q8NHP7-3 572 100% 0 0

Chromosomal Locations for CCDS 66738.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 41183931 41184593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41189937 41190128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41191442 41191585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41195775 41195855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41195933 41196037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41209501 41209587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41215775 41215833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41216668 41216795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41217097 41217154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41219830 41219898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41226443 41226575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1719 nt):
ATGGACCCCAGCAGTGACTACCATTTCCTCAGCCAGATTTTGTGGAAGAGGGTGAAACTCACATTGGTCT
GTGGTGTCTTCGAGGGTGTGCTTCAGCATGTTGACCCTAATAAGATTGTTGTCCTGAAGAAAGTGAAGAA
TGTGGAGACAGGTCGAAGTGTCCCAGGAGTGAAGTTGTTTTTTGGGCATGAGATTGTGAATGTGGAACTA
CTAGATGAAGTGGAACAAGGCTCAGTGAGAGCAAAAGCATCTTCTGTTAGTCTACATGCAGAAAGAACCT
GGATGGAGAAAATGAAAGTTGAAGACCTAAATGTATGTGAGCCTGCTTCTCCTGCCCCTGAAGCACCAGC
TACCTCTCTGCTGAATGACCTCAAGTACAGCCCATCAGAGGAAGAGGAGGTGACATACACAGTCATTAAT
CAATTCCAGCAGAAGTTTGGTGCTGCGATACTCCATATCAAGAAGCAGAATGTCCTGAGTGTGGCAGCAG
AAGGAGCGAATGTATGTCGCCATGGCAAACTGTGCTGGCTGCAGGTGGCCACAAATTGCCGAGTTTACTT
ATTTGACATTTTCCTTCTGGGAAGTCGAGCTTTCCACAATGGACTTCAGATGATACTAGAAGACAAGAGA
ATTTTGAAGGTTATCCATGATTGTCGTTGGCTTTCTGATTGCCTCTCTCATCAGTATGGAATTTTGCTGA
ATAATGTCTTTGACACACAGGTAGCAGATGTACTTCAGTTTTCCATGGAAACGGGTGGCTATCTTCCAAA
CTGCATCACTACTTTGCAGGAGAGTTTAATCAAACACCTTCAAGTAGCCCCTAAATATCTCTCCTTTCTA
GAAAAGAGACAAAAACTAATTCAGGAAAATCCAGAAGTATGGTTCATCCGACCTGTTTCACCCTCTTTAC
TGAAAATTTTGGCCCTGGAAGCTACCTACCTGTTACCCCTTCGCTTGGCACTCCTAGATGAGATGATGTC
TGACCTAACCACCCTGGTGGATGGTTACCTAAACACGTATCGCGAAGGGTCTGCAGACCGGCTTGGAGGC
ACTGAGCCTACATGTATGGAGCTGCCAGAGGAACTGCTTCAACTCAAGGACTTCCAGAAGCAGCGCAGGG
AGAAAGCTGCAAGAGAATATAGGGTGAATGCACAGGGACTCCTGATAAGGACAGTGCTACAGCCAAAGAA
ATTAGTGACAGAGACAGCAGGGAAAGAGGAGAAAGTCAAAGGCTTCTTATTTGGTAAAAATTTTAGGATA
GATAAAGCTCCAAGTTTTACATCTCAAGACTTTCACGGGGATGTGAATTTACTGAAAGAAGAATCTTTGA
ATAAACAAGCTACAAATCCTCAACATCTACCTCCCACAGAGGAAGGGGAAACCAGTGAGGATTCCAGTAA
CAAACTCATTTGCACAAAGTCAAAGGGGTCAGAGGACCAGAGAATAACTCAGAAAGAACACTTTATGACA
CCCAAACATGAGTTTCAGGCAAGTTTATCTTTGAAAGAGGAGACAGAACAGTTATTGATGGTGGAAAACA
AGGAAGATTTAAAATGCACAAAACAGGCTGTTTCAATGTCTTCCTTTCCTCAGGAAACCAGAGTGTCTCC
AAGTGACACTTTTTATCCTATCAGAAAGACTGTGGTTTCCACACTCCCTCCCTGTCCAGCCTTGGAGAAG
ATCGATTCCTGGATAAGTCCTTTTCTAAATCTGCCCTAG

Translation (572 aa):
MDPSSDYHFLSQILWKRVKLTLVCGVFEGVLQHVDPNKIVVLKKVKNVETGRSVPGVKLFFGHEIVNVEL
LDEVEQGSVRAKASSVSLHAERTWMEKMKVEDLNVCEPASPAPEAPATSLLNDLKYSPSEEEEVTYTVIN
QFQQKFGAAILHIKKQNVLSVAAEGANVCRHGKLCWLQVATNCRVYLFDIFLLGSRAFHNGLQMILEDKR
ILKVIHDCRWLSDCLSHQYGILLNNVFDTQVADVLQFSMETGGYLPNCITTLQESLIKHLQVAPKYLSFL
EKRQKLIQENPEVWFIRPVSPSLLKILALEATYLLPLRLALLDEMMSDLTTLVDGYLNTYREGSADRLGG
TEPTCMELPEELLQLKDFQKQRREKAAREYRVNAQGLLIRTVLQPKKLVTETAGKEEKVKGFLFGKNFRI
DKAPSFTSQDFHGDVNLLKEESLNKQATNPQHLPPTEEGETSEDSSNKLICTKSKGSEDQRITQKEHFMT
PKHEFQASLSLKEETEQLLMVENKEDLKCTKQAVSMSSFPQETRVSPSDTFYPIRKTVVSTLPPCPALEK
IDSWISPFLNLP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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