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Report for CCDS6831.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6831.1 Public Homo sapiens 9 STOM 24 110 108 CCDS HistoryNCBI Gene:2040Re-query CCDS DB by CCDS ID:6831.1Re-query CCDS DB by GeneID:2040See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6831.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000347359.3 ENSP00000339607.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000347359.3Link to Ensembl Protein Viewer:ENSP00000339607.2Re-query CCDS DB by Nucleotide ID:ENST00000347359Re-query CCDS DB by Protein ID:ENSP00000339607
Original member Current member NCBI NM_198194.3 NP_937837.1 Accepted alive Link to Nucleotide Sequence:NM_198194.3Link to Protein Sequence:NP_937837.1Re-query CCDS DB by Nucleotide ID:NM_198194Re-query CCDS DB by Protein ID:NP_937837Link to BLAST:NP_937837.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_937837.1 123 P27105-2 123 100% 0 0

Chromosomal Locations for CCDS 6831.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 121341202 121341408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121356053 121356156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 121370127 121370187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (372 nt):
ATGGCCGAGAAGCGGCACACACGGGACTCCGAAGCCCAGCGGCTCCCCGACTCCTTCAAGGACAGCCCCA
GTAAGGGCCTTGGACCTTGCGGATGGATTTTGGTGGCGTTCTCATTCTTATTCACCGTTATAACTTTCCC
AATCTCAATATGGATGTGCATAAAGGTTATTGCAGCCGAAGGAGAAATGAATGCATCCAGGGCTCTGAAA
GAAGCCTCCATGGTCATCACTGAATCTCCTGCAGCCCTTCAGCTCCGATACCTGCAGACACTGACCACCA
TTGCTGCTGAGAAAAACTCAACAATTGTCTTCCCTCTGCCCATAGATATGCTGCAAGGAATCATAGGGGC
AAAACACAGCCATCTAGGCTAG

Translation (123 aa):
MAEKRHTRDSEAQRLPDSFKDSPSKGLGPCGWILVAFSFLFTVITFPISIWMCIKVIAAEGEMNASRALK
EASMVITESPAALQLRYLQTLTTIAAEKNSTIVFPLPIDMLQGIIGAKHSHLG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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