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Report for CCDS69124.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69124.1 Public Homo sapiens 6 GTPBP2 24 110 108 CCDS HistoryNCBI Gene:54676Re-query CCDS DB by CCDS ID:69124.1Re-query CCDS DB by GeneID:54676See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 69124.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307114.11 ENSP00000304893.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000307114.11Link to Ensembl Protein Viewer:ENSP00000304893.7Re-query CCDS DB by Nucleotide ID:ENST00000307114Re-query CCDS DB by Protein ID:ENSP00000304893
Original member Current member NCBI NM_001286216.2 NP_001273145.1 Accepted alive Link to Nucleotide Sequence:NM_001286216.2Link to Protein Sequence:NP_001273145.1Re-query CCDS DB by Nucleotide ID:NM_001286216Re-query CCDS DB by Protein ID:NP_001273145Link to BLAST:NP_001273145.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273145.1 514 Q9BX10-2 514 100% 0 0

Chromosomal Locations for CCDS 69124.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 43621614 43621790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43622003 43622167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43622633 43622804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43623737 43623795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43623933 43624068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43624510 43624729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43624888 43625062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43625363 43625560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43625756 43625864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 43626226 43626359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1545 nt):
ATGAAGTGGCGGCTCCAGGAGGGACGTGGTGAGGCCGTCTACCAGATTGGGGTAGAGGACAATGGGCTGC
TGGTGGGGCTGGCTGAGGAGGAAATGCGAGCTTCGCTCAAGACCCTGCACCGGATGGCAGAGAAGGTTGG
GGCAGACATAACCGTTCTTCGAGAGCGAGAAGTGGATTATGATAGCGACATGCCCCGGAAGATCACCGAG
GTGCTAGTACGAAAGGTCCCTGACAACCAACAGTTCCTAGACCTCCGTGTGGCCGTCCTGGGGAATGTGG
ACTCTGGGAAGTCAACTCTGCTTGGAGTCCTGACCCAGGGAGAGCTGGACAATGGGCGGGGCCGGGCTCG
GCTCAACCTTTTCCGCCACCTGCATGAGATTCAGTCTGGCCGAACCTCCAGCATCAGCTTCGAGATCCTG
GGCTTTAACAGCAAGGGAGAGGTGGTGAATTACAGCGACTCACGGACAGCAGAAGAGATCTGTGAGAGCA
GCTCCAAGATGATCACCTTCATCGACCTGGCAGGCCACCATAAGTACCTACACACCACCATCTTTGGCCT
CACATCATACTGCCCCGACTGCGCCCTGCTCCTCGTCAGTGCCAACACTGGGATTGCTGGCACCACAAGG
GAACATCTGGGGCTGGCCCTGGCCCTGAAAGTGCCCTTCTTCATCGTGGTCAGCAAGATCGACCTATGTG
CCAAGACCACAGTGGAGAGGACAGTACGCCAGCTGGAGCGGGTCCTCAAGCAGCCTGGCTGCCACAAGGT
CCCCATGCTGGTCACCTCTGAGGATGATGCCGTCACTGCTGCCCAGCAGTTTGCTCAGTCACCCAATGTC
ACCCCCATCTTCACATTGTCCAGTGTGTCTGGAGAGAGTCTGGACCTCCTCAAAGTCTTTCTGAATATTC
TGCCGCCACTCACCAACAGCAAAGAGCAGGAGGAACTCATGCAGCAGCTGACGGAGTTCCAGGTGGATGA
AATCTACACAGTACCAGAGGTGGGGACTGTTGTTGGAGGAACACTTTCCAGTGGGATTTGCCGTGAGGGG
GACCAGCTGGTGGTGGGCCCCACGGATGATGGCTGCTTCCTGGAGCTGAGAGTATGCAGCATCCAGCGCA
ACCGCTCTGCCTGTCGTGTGCTGCGAGCTGGTCAGGCTGCTACACTGGCGCTTGGGGACTTTGACCGTGC
ACTGCTTCGCAAGGGCATGGTGATGGTGAGCCCGGAGATGAATCCTACCATCTGCTCGGTGTTTGAGGCA
GAGATAGTCTTACTGTTCCATGCCACCACCTTCCGACGAGGATTCCAGGTGACAGTACACGTGGGCAACG
TACGTCAGACGGCAGTGGTGGAAAAGATCCATGCCAAGGACAAACTGCGGACAGGCGAGAAGGCAGTGGT
ACGTTTCCGCTTCCTGAAACACCCAGAGTACCTGAAGGTGGGCGCCAAACTGCTGTTCCGGGAGGGTGTC
ACCAAGGGCATCGGCCATGTCACTGATGTACAAGCCATTACAGCAGGAGAAGCCCAGGCCAACATGGGCT
TCTGA

Translation (514 aa):
MKWRLQEGRGEAVYQIGVEDNGLLVGLAEEEMRASLKTLHRMAEKVGADITVLREREVDYDSDMPRKITE
VLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLGVLTQGELDNGRGRARLNLFRHLHEIQSGRTSSISFEIL
GFNSKGEVVNYSDSRTAEEICESSSKMITFIDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGIAGTTR
EHLGLALALKVPFFIVVSKIDLCAKTTVERTVRQLERVLKQPGCHKVPMLVTSEDDAVTAAQQFAQSPNV
TPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVPEVGTVVGGTLSSGICREG
DQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALGDFDRALLRKGMVMVSPEMNPTICSVFEA
EIVLLFHATTFRRGFQVTVHVGNVRQTAVVEKIHAKDKLRTGEKAVVRFRFLKHPEYLKVGAKLLFREGV
TKGIGHVTDVQAITAGEAQANMGF


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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