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Report for CCDS70493.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70493.1 Public Mus musculus 13 Ankra2 23 108 98 CCDS HistoryNCBI Gene:68558Re-query CCDS DB by CCDS ID:70493.1Re-query CCDS DB by GeneID:68558See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70493.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000123924.7 ENSMUSP00000122701.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000123924.7Link to Ensembl Protein Viewer:ENSMUSP00000122701.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000123924Re-query CCDS DB by Protein ID:ENSMUSP00000122701
Original member Current member NCBI NM_001271388.1 NP_001258317.1 Accepted alive Link to Nucleotide Sequence:NM_001271388.1Link to Protein Sequence:NP_001258317.1Re-query CCDS DB by Nucleotide ID:NM_001271388Re-query CCDS DB by Protein ID:NP_001258317Link to BLAST:NP_001258317.1

Chromosomal Locations for CCDS 70493.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 98266247 98266532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 98267316 98267474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 98268430 98268495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 98271055 98271152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 98271654 98271779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 98272226 98272292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 98272772 98272884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (915 nt):
ATGGCTACATCTGCAAATCTGGACATTGGGGCCCAGCTGATCGTGGAAGAGTGTCCCAGCAGCTATATCT
CTGGGATGCCAGACATCAAGCTAGAGCACCAGCTAGACCCAAACCCAGATGAAGGAGCAGCCCAGGGCGT
CGCCATGGGGATGAAATTCATATTGCCAAACCGATTTGATATGAACGTGTGTTCTCGATTCGTGAAGTCC
TTAAATGAAGAGGATAGTAAAAATATTCAAGATCAAGTTAACTCTGACCTGGAGGTGGCATCTGTCTTAT
TTAAAGCTGAGTGCAATATCCATACATCTCCTTCTCCTGGAATTCAAGTAAGGCATGTCTACACACCATC
TACAACAAAACATTTCTCACCCATAAAACAGTCAACTACTTTAACCAACAAGCACAGGGGAAACGAGGTC
TCTACCACACCTCTGTTAGCAAATTCTCTGTCTGCTCACCAGTTGGCAGCCCAGGGAGAGATGCTCTACC
TGGCTACTCGTATTGAACAAGAAAATGTTATCAATCACACGGATGAAGAAGGATTTACCCCCCTGATGTG
GGCTGCGGCACATGGGCAAATAGCTGTGGTAGAGTTCCTTCTTCAGAATGGTGCAGATCCCCAGCTTCTA
GGAAAAGGTCGAGAAAGTGCTCTGTCTCTTGCCTGTAGCAAGGGCTACACAGACATTGTCAAAATGCTGC
TTGACTGTGGAGTTGACGTCAATGAATATGACTGGAACGGAGGGACACCTTTGCTTTACGCTGTCCATGG
GAACCACGTGAAGTGCGTGAAGATGCTGTTGGAAAATGGAGCTGACCCAACAATTGAAACAGACTCTGGC
TATAATTCTATGGACCTAGCTGTAGCTTTGGGCTACAGAGGTGGTGAGTATTTTAGAACTCTCGGGTCAT
TTTAG

Translation (304 aa):
MATSANLDIGAQLIVEECPSSYISGMPDIKLEHQLDPNPDEGAAQGVAMGMKFILPNRFDMNVCSRFVKS
LNEEDSKNIQDQVNSDLEVASVLFKAECNIHTSPSPGIQVRHVYTPSTTKHFSPIKQSTTLTNKHRGNEV
STTPLLANSLSAHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLL
GKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLENGADPTIETDSG
YNSMDLAVALGYRGGEYFRTLGSF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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