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Report for CCDS70611.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
70611.1 Public Mus musculus 14 Kctd12 23 108 98 CCDS HistoryNCBI Gene:239217Re-query CCDS DB by CCDS ID:70611.1Re-query CCDS DB by GeneID:239217See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 70611.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000184744.1 ENSMUSP00000139261.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000184744.1Link to Ensembl Protein Viewer:ENSMUSP00000139261.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000184744Re-query CCDS DB by Protein ID:ENSMUSP00000139261
Original member Current member NCBI NM_177715.4 NP_808383.3 Accepted alive Link to Nucleotide Sequence:NM_177715.4Link to Protein Sequence:NP_808383.3Re-query CCDS DB by Nucleotide ID:NM_177715Re-query CCDS DB by Protein ID:NP_808383Link to BLAST:NP_808383.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808383.3 327 Q6WVG3 327 99.3884% 0 2

Chromosomal Locations for CCDS 70611.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 102981457 102982440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (984 nt):
ATGGCTCTGGCGGACAGCACCCGAGGATTACCCAACGGGGGCGGAGGCGGAGGTGGCAGCGGCTCGTCGT
CGTCCTCGGCGGAGCCGCCGCTCTTCCCGGACATCGTAGAGCTGAACGTGGGAGGGCAGGTGTATGTGAC
CCGGCGCTGCACCGTGGTGTCCGTGCCCGACTCGCTGCTCTGGCGTATGTTCACGCAGCAGCAGCCGCAG
GAGCTGGCCCGGGACAGCAAAGGCCGCTTCTTTCTGGACCGGGACGGCTTCCTCTTCCGCTACATCCTGG
ATTACCTGCGGGACTTGCAGCTCGTGCTGCCCGACTACTTCCCGGAGCGCAGCCGGCTGCAGCGCGAGGC
CGAGTACTTCGAGCTGCCGGAGCTCGTGCGTCGCCTCGGGGCGCCCCAGCAACCCGGTCCGGGGCCACCG
CCGCCGCACTCGCGCCGCGGGGTGCACAAGGAGGGCTCTCTGGGCGATGAGCTGCTGCCGCTGGGCTACG
CAGAGCCCGAGCCGCAGGAGGGCGCCTCGGCCGGGGCGCCTTCGCCCACGCTGGAGCTGGCTAGCCGCAG
CCCGTCCGGGGGCGCGGCGGGGCCCCTGCTCACGCCGTCCCAGTCTTTGGACGGCAGCCGGCGCTCCGGC
TACATCACCATCGGCTACCGCGGCTCCTACACCATCGGGCGCGACGCTCAGGCGGACGCCAAGTTCCGGC
GGGTGGCGCGCATCACCGTGTGCGGCAAGACGTCGCTGGCCAAGGAGGTGTTTGGGGACACCCTGAATGA
GAGCCGGGACCCCGACCGGCCCCCGGAGCGCTACACCTCCCGCTATTACCTCAAGTTCAACTTCCTAGAG
CAGGCCTTCGATAAGCTGTCCGAGTCGGGCTTCCACATGGTGGCGTGCAGCTCCACGGGCACCTGCGCTT
TTGCTAGCAGCACCGACCAGAGCGAGGACAAGATCTGGACCAGCTACACCGAGTACGTCTTCTGCAGGGA
GTGA

Translation (327 aa):
MALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLLWRMFTQQQPQ
ELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYFELPELVRRLGAPQQPGPGPP
PPHSRRGVHKEGSLGDELLPLGYAEPEPQEGASAGAPSPTLELASRSPSGGAAGPLLTPSQSLDGSRRSG
YITIGYRGSYTIGRDAQADAKFRRVARITVCGKTSLAKEVFGDTLNESRDPDRPPERYTSRYYLKFNFLE
QAFDKLSESGFHMVACSSTGTCAFASSTDQSEDKIWTSYTEYVFCRE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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